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1
In front of and behind the replication fork: bacterial type IIA topoisomerases.
Cell Mol Life Sci. 2010 Jun;67(12):2001-24. doi: 10.1007/s00018-010-0299-5. Epub 2010 Feb 18.
2
What makes a type IIA topoisomerase a gyrase or a Topo IV?
Nucleic Acids Res. 2021 Jun 21;49(11):6027-6042. doi: 10.1093/nar/gkab270.
3
The mechanism of negative DNA supercoiling: a cascade of DNA-induced conformational changes prepares gyrase for strand passage.
DNA Repair (Amst). 2014 Apr;16:23-34. doi: 10.1016/j.dnarep.2014.01.011. Epub 2014 Feb 22.
5
A naturally chimeric type IIA topoisomerase in Aquifex aeolicus highlights an evolutionary path for the emergence of functional paralogs.
Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):22055-9. doi: 10.1073/pnas.1012938107. Epub 2010 Nov 12.
6
Evolutionary twist on topoisomerases: conversion of gyrase to topoisomerase IV.
Proc Natl Acad Sci U S A. 2010 Dec 28;107(52):22363-4. doi: 10.1073/pnas.1016041108. Epub 2010 Dec 17.
7
Functional analysis of three topoisomerases that regulate DNA supercoiling levels in Chlamydia.
Mol Microbiol. 2016 Feb;99(3):484-96. doi: 10.1111/mmi.13241. Epub 2015 Nov 13.
8
Inhibition of Neisseria gonorrhoeae Type II Topoisomerases by the Novel Spiropyrimidinetrione AZD0914.
J Biol Chem. 2015 Aug 21;290(34):20984-20994. doi: 10.1074/jbc.M115.663534. Epub 2015 Jul 6.
9
DNA Topoisomerases as Targets for Antibacterial Agents.
Methods Mol Biol. 2018;1703:47-62. doi: 10.1007/978-1-4939-7459-7_3.

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2
DNA Cleavage Mediated by Bacterial Type II Topoisomerases.
Methods Mol Biol. 2025;2928:63-71. doi: 10.1007/978-1-0716-4550-5_6.
3
DNA Decatenation Catalyzed by Bacterial Topoisomerase IV.
Methods Mol Biol. 2025;2928:51-61. doi: 10.1007/978-1-0716-4550-5_5.
4
Different propensities for gate opening in gyrases and topoisomerase IV.
Nucleic Acids Res. 2025 Apr 22;53(8). doi: 10.1093/nar/gkaf330.
5
Escherichia coli DNA replication: the old model organism still holds many surprises.
FEMS Microbiol Rev. 2024 Jun 20;48(4). doi: 10.1093/femsre/fuae018.
6
Interactions between Gepotidacin and Gyrase and Topoisomerase IV: Genetic and Biochemical Evidence for Well-Balanced Dual-Targeting.
ACS Infect Dis. 2024 Apr 12;10(4):1137-1151. doi: 10.1021/acsinfecdis.3c00346. Epub 2024 Mar 5.
7
Friend or Foe: Protein Inhibitors of DNA Gyrase.
Biology (Basel). 2024 Jan 29;13(2):84. doi: 10.3390/biology13020084.
8
Discovery and druggability evaluation of pyrrolamide-type GyrB/ParE inhibitor against drug-resistant bacterial infection.
Acta Pharm Sin B. 2023 Dec;13(12):4945-4962. doi: 10.1016/j.apsb.2023.08.030. Epub 2023 Sep 9.

本文引用的文献

1
DNA supercoiling and its role in DNA decatenation and unknotting.
Nucleic Acids Res. 2010 Apr;38(7):2119-33. doi: 10.1093/nar/gkp1161. Epub 2009 Dec 21.
2
A crystal structure of the bifunctional antibiotic simocyclinone D8, bound to DNA gyrase.
Science. 2009 Dec 4;326(5958):1415-8. doi: 10.1126/science.1179123.
3
Mapping simocyclinone D8 interaction with DNA gyrase: evidence for a new binding site on GyrB.
Antimicrob Agents Chemother. 2010 Jan;54(1):213-20. doi: 10.1128/AAC.00972-09. Epub 2009 Oct 26.
4
Single DNA/protein studies with magnetic traps.
Curr Opin Struct Biol. 2009 Oct;19(5):615-22. doi: 10.1016/j.sbi.2009.08.005. Epub 2009 Sep 23.
5
The DNA-gate of Bacillus subtilis gyrase is predominantly in the closed conformation during the DNA supercoiling reaction.
Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13278-83. doi: 10.1073/pnas.0902493106. Epub 2009 Jul 29.
6
Crystal structure of DNA gyrase B' domain sheds lights on the mechanism for T-segment navigation.
Nucleic Acids Res. 2009 Sep;37(17):5908-16. doi: 10.1093/nar/gkp586. Epub 2009 Jul 13.
7
Probing the differential interactions of quinazolinedione PD 0305970 and quinolones with gyrase and topoisomerase IV.
Antimicrob Agents Chemother. 2009 Sep;53(9):3822-31. doi: 10.1128/AAC.00113-09. Epub 2009 Jun 29.
8
Interplay of DNA supercoiling and catenation during the segregation of sister duplexes.
Nucleic Acids Res. 2009 Aug;37(15):5126-37. doi: 10.1093/nar/gkp530. Epub 2009 Jun 24.
9
Internal dynamics of supercoiled DNA molecules.
Biophys J. 2009 Jun 17;96(12):4951-5. doi: 10.1016/j.bpj.2009.03.056.

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