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复制叉的前后:细菌 IIA 拓扑异构酶。

In front of and behind the replication fork: bacterial type IIA topoisomerases.

机构信息

Department of Pharmaceutical Sciences, University of Padova, Via Marzolo 5, 35131, Padua, Italy.

出版信息

Cell Mol Life Sci. 2010 Jun;67(12):2001-24. doi: 10.1007/s00018-010-0299-5. Epub 2010 Feb 18.

DOI:10.1007/s00018-010-0299-5
PMID:20165898
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11115839/
Abstract

Topoisomerases are vital enzymes specialized in controlling DNA topology, in particular supercoiling and decatenation, to properly handle nucleic acid packing and cell dynamics. The type IIA enzymes act by cleaving both strands of a double helix and having another strand from the same or another molecule cross the DNA gate before a re-sealing event completes the catalytic cycle. Here, we will consider the two types of IIA prokaryotic topoisomerases, DNA Gyrase and Topoisomerase IV, as crucial regulators of bacterial cell cycle progression. Their synergistic action allows control of chromosome packing and grants occurrence of functional transcription and replication processes. In addition to displaying a fascinating molecular mechanism of action, which transduces chemical energy into mechanical energy by means of large conformational changes, these enzymes represent attractive pharmacological targets for antibacterial chemotherapy.

摘要

拓扑异构酶是一类专门控制 DNA 拓扑结构的重要酶,特别是超螺旋和解连环,以正确处理核酸包装和细胞动力学。IIA 型酶通过切割双链 DNA 并使来自同一分子或另一个分子的另一条链穿过 DNA 门,然后在重新封闭事件完成催化循环之前,发挥作用。在这里,我们将考虑两种类型的 IIA 原核拓扑异构酶,DNA 回旋酶和拓扑异构酶 IV,作为细菌细胞周期进展的关键调节剂。它们的协同作用允许控制染色体包装,并赋予功能转录和复制过程的发生。除了表现出一种迷人的分子作用机制,即通过大构象变化将化学能量转化为机械能之外,这些酶还代表了抗菌化疗的有吸引力的药理靶标。

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Cell Mol Life Sci. 2010 Jun;67(12):2001-24. doi: 10.1007/s00018-010-0299-5. Epub 2010 Feb 18.
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本文引用的文献

1
DNA supercoiling and its role in DNA decatenation and unknotting.DNA 超螺旋及其在 DNA 解连环和去纽结中的作用。
Nucleic Acids Res. 2010 Apr;38(7):2119-33. doi: 10.1093/nar/gkp1161. Epub 2009 Dec 21.
2
A crystal structure of the bifunctional antibiotic simocyclinone D8, bound to DNA gyrase.双功能抗生素西蒙菌素 D8 与 DNA 拓扑异构酶的晶体结构。
Science. 2009 Dec 4;326(5958):1415-8. doi: 10.1126/science.1179123.
3
Mapping simocyclinone D8 interaction with DNA gyrase: evidence for a new binding site on GyrB.绘制 simocyclinone D8 与 DNA 拓扑异构酶Ⅱ的相互作用图谱:GyrB 上新的结合位点证据。
Antimicrob Agents Chemother. 2010 Jan;54(1):213-20. doi: 10.1128/AAC.00972-09. Epub 2009 Oct 26.
4
Single DNA/protein studies with magnetic traps.利用磁阱进行的单DNA/蛋白质研究。
Curr Opin Struct Biol. 2009 Oct;19(5):615-22. doi: 10.1016/j.sbi.2009.08.005. Epub 2009 Sep 23.
5
The DNA-gate of Bacillus subtilis gyrase is predominantly in the closed conformation during the DNA supercoiling reaction.在DNA超螺旋反应过程中,枯草芽孢杆菌促旋酶的DNA门主要处于关闭构象。
Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13278-83. doi: 10.1073/pnas.0902493106. Epub 2009 Jul 29.
6
Crystal structure of DNA gyrase B' domain sheds lights on the mechanism for T-segment navigation.DNA 促旋酶 B' 结构域的晶体结构揭示了 T 段导航机制。
Nucleic Acids Res. 2009 Sep;37(17):5908-16. doi: 10.1093/nar/gkp586. Epub 2009 Jul 13.
7
Probing the differential interactions of quinazolinedione PD 0305970 and quinolones with gyrase and topoisomerase IV.探究喹唑啉二酮PD 0305970和喹诺酮类药物与促旋酶和拓扑异构酶IV的差异相互作用。
Antimicrob Agents Chemother. 2009 Sep;53(9):3822-31. doi: 10.1128/AAC.00113-09. Epub 2009 Jun 29.
8
Interplay of DNA supercoiling and catenation during the segregation of sister duplexes.姐妹双链分离过程中DNA超螺旋与连环现象的相互作用。
Nucleic Acids Res. 2009 Aug;37(15):5126-37. doi: 10.1093/nar/gkp530. Epub 2009 Jun 24.
9
Internal dynamics of supercoiled DNA molecules.超螺旋DNA分子的内部动力学
Biophys J. 2009 Jun 17;96(12):4951-5. doi: 10.1016/j.bpj.2009.03.056.
10
The QTK loop is essential for the communication between the N-terminal atpase domain and the central cleavage--ligation region in human topoisomerase IIalpha.QTK环对于人类拓扑异构酶IIα中N端ATP酶结构域与中心切割-连接区域之间的通讯至关重要。
Biochemistry. 2009 Jul 14;48(27):6508-15. doi: 10.1021/bi9005978.