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四种新的黄海杆菌属细菌来自沿海沙丘植物根际,分别为黄海杆菌 elymi 新种、黄海杆菌 hagamense 新种、黄海杆菌 lathyri 新种和黄海杆菌 rhizosphaerae 新种。

Four new species of Chryseobacterium from the rhizosphere of coastal sand dune plants, Chryseobacterium elymi sp. nov., Chryseobacterium hagamense sp. nov., Chryseobacterium lathyri sp. nov. and Chryseobacterium rhizosphaerae sp. nov.

机构信息

Department of Microbiology, School of Bioscience and Biotechnology, Chungnam National University, 220 Gung-dong, Yuseong, Daejeon 305-764, Republic of Korea.

出版信息

Syst Appl Microbiol. 2010 Apr;33(3):122-7. doi: 10.1016/j.syapm.2009.12.004. Epub 2010 Feb 24.

Abstract

The taxonomic positions of five Gram-negative, non-spore-forming and non-motile bacterial strains isolated from the rhizosphere of sand dune plants were examined using a polyphasic approach. The analysis of the 16S rRNA gene sequence indicated that all of the isolates fell into four distinct phylogenetic clusters belonging to the genus Chryseobacterium of the family Flavobacteriaceae. The 16S rRNA gene sequence similarities of isolates to mostly related type strains of Chryseobacterium ranged from 97.5% to 98.5%. All strains contained MK-6 as the predominant menaquinone, and iso-C(15:0), iso-C(17:0) 3-OH and a summed feature of iso-C(15:0) 2-OH and/or C(16:1) omega7c as the dominant fatty acids. Combined phenotypic, genotypic and chemotaxonomic data supported that they represented four novel species in the genus Chryseobacterium, for which the names Chryseobacterium hagamense sp. nov. (type strain RHA2-9(T)=KCTC 22545(T)=NBRC 105253(T)), Chryseobacterium elymi sp. nov. (type strain RHA3-1(T)=KCTC 22547(T)=NBRC 105251(T)), Chryseobacterium lathyri sp. nov. (type strain RBA2-6(T)=KCTC 22544(T)=NBRC 105250(T)), and Chryseobacterium rhizosphaerae sp. nov. (type strain RSB3-1(T)=KCTC 22548(T)=NBRC 105248(T)) are proposed.

摘要

采用多相分类法研究了从沙丘植物根际分离得到的 5 株革兰氏阴性、非孢子形成和非运动细菌的分类地位。16S rRNA 基因序列分析表明,所有分离株均属于黄杆菌科黄杆菌属的四个不同的系统发育群。分离株与黄杆菌属大多数相关模式菌株的 16S rRNA 基因序列相似性为 97.5%至 98.5%。所有菌株均含有 MK-6 作为主要的menaquinone,以及异-C(15:0)、异-C(17:0) 3-OH 和异-C(15:0) 2-OH 和/或 C(16:1) ω7c 的总和特征作为主要脂肪酸。表型、基因型和化学分类学数据综合表明,它们代表了黄杆菌属中的四个新种,分别命名为 Hagama 黄杆菌(RHA2-9(T)=KCTC 22545(T)=NBRC 105253(T))、Elymi 黄杆菌(RHA3-1(T)=KCTC 22547(T)=NBRC 105251(T))、Lathyri 黄杆菌(RBA2-6(T)=KCTC 22544(T)=NBRC 105250(T))和 Rhizosphaera 黄杆菌(RSB3-1(T)=KCTC 22548(T)=NBRC 105248(T))。

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