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匈牙利金黄杆菌新种,从受烃污染土壤中分离得到。

Chryseobacterium hungaricum sp. nov., isolated from hydrocarbon-contaminated soil.

作者信息

Szoboszlay Sándor, Atzél Béla, Kukolya József, Tóth Erika M, Márialigeti Károly, Schumann Peter, Kriszt Balázs

机构信息

Department of Environmental Protection and Environmental Safety, Szent István University, Gödöllo, Hungary.

出版信息

Int J Syst Evol Microbiol. 2008 Dec;58(Pt 12):2748-54. doi: 10.1099/ijs.0.65847-0.

Abstract

The taxonomic position of a strain isolated from kerosene-contaminated soil in Hungary and formerly misidentified as Brevundimonas vesicularis was examined using a polyphasic approach. The isolate, designated CHB-20p(T), could be clearly assigned to the genus Chryseobacterium (family Flavobacteriaceae) on the basis of 16S rRNA gene sequence similarity. Strain CHB-20p(T), a moderate oil degrader, was a Gram-negative, aerobic, mesophilic microbe with a temperature optimum of 28-30 degrees C. Predominant fatty acids were iso-C(15 : 0), summed feature 3 (comprising C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH) and iso-C(17 : 0) 3-OH. Menaquinone-6 (MK-6) was the predominant respiratory quinone; MK-5 was present as a minor component. The almost complete 16S rRNA gene sequence of strain CHB-20p(T) shared 94-97 % similarity with sequences of the type strains of species of the genus Chryseobacterium. DNA-DNA relatedness between strain CHB-20p(T) and its closest relative, Chryseobacterium caeni, was lower than 46 %. Moreover, several diagnostic phenotypic properties distinguished strain CHB-20p(T) from C. caeni. On the basis of biochemical, chemotaxonomic and genotypic data, isolate CHB-20p(T) represents a novel species within the genus Chryseobacterium, Chryseobacterium hungaricum sp. nov.; the type strain is CHB-20p(T) (=NCAIM B2269(T)=DSM 19684(T)).

摘要

采用多相分类方法对从匈牙利受煤油污染土壤中分离出的、曾被误鉴定为泡囊短波单胞菌的一株菌株的分类地位进行了研究。该分离株命名为CHB-20p(T),基于16S rRNA基因序列相似性,可明确归属于金黄杆菌属(黄杆菌科)。CHB-20p(T)菌株是一种中度石油降解菌,为革兰氏阴性、需氧、嗜温微生物,最适温度为28 - 30℃。主要脂肪酸为异C(15 : 0)、特征性总和3(包括C(16 : 1)ω7c和/或异C(15 : 0) 2-OH)以及异C(17 : 0) 3-OH。甲基萘醌-6(MK-6)是主要的呼吸醌;MK-5作为次要成分存在。CHB-20p(T)菌株几乎完整的16S rRNA基因序列与金黄杆菌属各物种模式菌株的序列相似性为94 - 97%。CHB-20p(T)菌株与其最接近的亲缘种——嗜泥金黄杆菌之间的DNA - DNA相关性低于46%。此外,一些诊断性表型特征也将CHB-20p(T)菌株与嗜泥金黄杆菌区分开来。基于生化、化学分类和基因型数据,分离株CHB-20p(T)代表金黄杆菌属内一个新物种,命名为匈牙利金黄杆菌(Chryseobacterium hungaricum sp. nov.);模式菌株为CHB-20p(T)(=NCAIM B2269(T)=DSM 19684(T))。

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