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新种。从两个湖泊的地表水分离得到,具有光诱导类胡萝卜素产生。

sp. nov. Isolated From the Surface Water of Two Lakes With Light-Induced Carotenoid Production.

作者信息

Zhang Jing, Gao Cheng, Yu Xue-Mei, Lun He-Yuan, Du Zong-Jun

机构信息

Marine College, Shandong University, Weihai, China.

State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China.

出版信息

Front Microbiol. 2020 Mar 4;11:251. doi: 10.3389/fmicb.2020.00251. eCollection 2020.

Abstract

Two Gram-stain-negative, rod-shaped, gliding, catalase-positive, and facultative anaerobic strains, YLOS41 and XH07, were isolated from surface water of Yilong Lake and West Lake of Dali in Yunnan Province, respectively. Both strains were yellow-colored under light conditions and white-colored under dark conditions. The results of physiological and chemotaxonomic characterization, sequencing and phylogenetic analysis, and draft genome sequence comparison demonstrated that the two strains represented a single novel species within the genus , for which the name sp. nov. is proposed. The type strain is YLOS41 (= KCTC 62352 = MCCC 1H00300), and the second strain is XH07 (= KCTC 62993). During the cultivation process, we found that the colony color of the two strains changed from white to yellow with illumination. The study investigated the effects of light irradiation on the strain YLOS41. Results showed that light irradiation did not affect the growth of cells but significantly increased carotenoid synthesis, which caused the change of colony color. In-depth metabolic analysis was conducted by transcriptome. The predominant changes were found for genes involved in carotenoid synthesis as protection from light damage. Based on the genome and transcriptome, we proved that strain YLOS41 possessed a complete synthetic pathway of carotenoid and speculated that the production was zeaxanthin. This was the first report of species with light-induced carotenoid synthesis. This study enhances our present knowledge on how species isolated from surface water responds to light damage.

摘要

从云南省异龙湖和大理西湖的地表水分别分离出两株革兰氏阴性、杆状、滑行、过氧化氢酶阳性且兼性厌氧的菌株,分别为YLOS41和XH07。两株菌在光照条件下呈黄色,在黑暗条件下呈白色。生理和化学分类特征、测序和系统发育分析以及基因组草图序列比较的结果表明,这两株菌代表了该属内的一个新物种,为此提出新物种名 sp. nov.。模式菌株为YLOS41(=KCTC 62352 = MCCC 1H00300),第二株为XH07(=KCTC 62993)。在培养过程中,我们发现这两株菌的菌落颜色随着光照从白色变为黄色。该研究调查了光照对菌株YLOS41的影响。结果表明,光照不影响细胞生长,但显著增加类胡萝卜素合成,这导致了菌落颜色的变化。通过转录组进行了深入的代谢分析。发现参与类胡萝卜素合成以防止光损伤的基因发生了主要变化。基于基因组和转录组,我们证明菌株YLOS41拥有完整的类胡萝卜素合成途径,并推测其产物为玉米黄质。这是关于具有光诱导类胡萝卜素合成的 物种的首次报道。这项研究增进了我们目前对从地表水分离出的 物种如何应对光损伤的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8f4/7064467/6cd2472318e7/fmicb-11-00251-g001.jpg

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