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东海假交替单胞菌新种,从海水中分离得到。

Pseudoalteromonas donghaensis sp. nov., isolated from seawater.

机构信息

Department of Microbiology and Biotechnology Research Institute, Chungbuk National University, Cheongju 361-763, Chungbuk, Republic of Korea.

School of Electrical and Computer Engineering, Chungbuk National University, Cheongju 361-763, Chungbuk, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2011 Feb;61(Pt 2):351-355. doi: 10.1099/ijs.0.022541-0. Epub 2010 Mar 12.

Abstract

A Gram-negative, rod-shaped, motile and aerobic bacterium, designated strain HJ51(T), was isolated from a seawater sample from the East Sea, near South Korea. The isolate grew slowly at 4 °C, was able to grow at 40 °C, required NaCl and grew optimally at pH 6.5-7.0. The G+C content of the genomic DNA was 41.8 mol%. The major fatty acids were summed feature 4 (C(16 : 1)ω7c and/or iso-C(15 : 0) 2-OH), C(16 : 0) and summed feature 7 (C(18 : 1)ω7c, C(18 : 1)ω9t and/or C(18 : 1)ω12t). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain HJ51(T) belonged to the genus Pseudoalteromonas and had 91.7-98.9 % 16S rRNA gene sequence similarity with type strains of species of the genus Pseudoalteromonas. Strain HJ51(T) had 7.2 % DNA-DNA relatedness with Pseudoalteromonas mariniglutinosa DSM 15203(T) and 12.9 % with Pseudoalteromonas prydzensis DSM 14232(T). On the basis of the phenotypic, phylogenetic and genomic data, strain HJ51(T) represents a novel species of the genus Pseudoalteromonas, for which the name Pseudoalteromonas donghaensis sp. nov. is proposed. The type strain is HJ51(T) (=KCTC 22219(T)=LMG 24469(T)).

摘要

一株革兰氏阴性、杆状、运动和需氧细菌,被命名为 HJ51(T) 菌株,从韩国附近东海的海水样本中分离得到。该分离株在 4°C 下生长缓慢,能够在 40°C 下生长,需要 NaCl,最适生长 pH 值为 6.5-7.0。基因组 DNA 的 G+C 含量为 41.8 mol%。主要脂肪酸为 sumed feature 4 (C(16 : 1)ω7c 和/或 iso-C(15 : 0) 2-OH)、C(16 : 0)和 summed feature 7 (C(18 : 1)ω7c、C(18 : 1)ω9t 和/或 C(18 : 1)ω12t)。基于 16S rRNA 基因序列的系统发育分析表明,HJ51(T) 菌株属于假交替单胞菌属,与假交替单胞菌属的模式种的 16S rRNA 基因序列相似度为 91.7-98.9%。HJ51(T) 菌株与 Pseudoalteromonas mariniglutinosa DSM 15203(T) 的 DNA-DNA 同源性为 7.2%,与 Pseudoalteromonas prydzensis DSM 14232(T) 的同源性为 12.9%。基于表型、系统发育和基因组数据,HJ51(T) 菌株代表了假交替单胞菌属的一个新种,现命名为 Donghaensis 假交替单胞菌 sp. nov.。模式菌株为 HJ51(T)=KCTC 22219(T)=LMG 24469(T)。

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