• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从海参中分离出的新种。

sp. nov. isolated from the sea cucumber .

作者信息

Yvin Marion, Mühle Estelle, Chesneau Olivier, Laguerre Hélène, Brillet Benjamin, Fleury Yannick, Jégou Camille, Kämpfer Peter, Lipski André, Criscuolo Alexis, Clermont Dominique, Le Chevalier Patrick

机构信息

Université de Brest, Laboratoire de Biotechnologie et Chimie Marines, LBCM, EMR-CNRS 6076, F-29000 Quimper, France.

Université Bretagne Sud, IRDL, UMR CNRS 6027, F-56100 Lorient, France.

出版信息

Int J Syst Evol Microbiol. 2025 Feb;75(2). doi: 10.1099/ijsem.0.006601.

DOI:10.1099/ijsem.0.006601
PMID:39999156
Abstract

Two motile bacterial strains, designated as cfHf56-1 and SW 252, were isolated from the coelomic fluid of and from the surrounding seawater at the animal sampling site, respectively. The sea cucumber was collected in the Glénan archipelago (Brittany, France). Strains cfHf56-1 and SW 252 were Gram-stain-negative, non-spore-forming and rod-shaped bacteria. Colonies made on marine agar plates were brown in color. The pH and temperature ranges for growth were 7-8 and 18-30 °C, respectively, in marine broth. The major fatty acids were 16 : 1 cis9 and 16 : 0. Phylogenetic analyses evidenced that both strains belong to a novel species in the genus . The strains were closely related to the type strains of , and with 75-78 % ANI and 19-21 % dDDH values. In this context, cfHf56-1 (= CIP 111854 = CECT 30642) is considered as the type strain of the novel species for which the name sp. nov. is proposed. The genome of the type strain is characterized by a size of 5.1 Mbp and a G+C content of 40.5%.

摘要

从海参体腔液和动物采样点周围海水中分别分离出两株运动性细菌菌株,分别命名为cfHf56-1和SW 252。海参采自法国布列塔尼的格莱南群岛。菌株cfHf56-1和SW 252为革兰氏阴性、无芽孢、杆状细菌。在海洋琼脂平板上形成的菌落呈褐色。在海洋肉汤中生长的pH值和温度范围分别为7-8和18-30°C。主要脂肪酸为16:1 cis9和16:0。系统发育分析表明,这两个菌株属于该属中的一个新物种。这些菌株与 的模式菌株密切相关,ANI值为75-78%,dDDH值为19-21%。在此背景下,cfHf56-1(=CIP 111854 = CECT 30642)被视为该新物种的模式菌株,为此提议命名为 sp. nov.。模式菌株的基因组大小为5.1 Mbp,G+C含量为40.5%。

相似文献

1
sp. nov. isolated from the sea cucumber .从海参中分离出的新种。
Int J Syst Evol Microbiol. 2025 Feb;75(2). doi: 10.1099/ijsem.0.006601.
2
sp. nov. and sp. nov., and reclassification of , , and as later heterotypic synonyms of , , and .新种和新种,以及重新分类为后来的异型同义词。
Int J Syst Evol Microbiol. 2024 Aug;74(8). doi: 10.1099/ijsem.0.006491.
3
sp. nov., isolated from a tidal flat.sp. nov.,分离自潮汐滩。
Int J Syst Evol Microbiol. 2020 Dec;70(12):6301-6306. doi: 10.1099/ijsem.0.004532.
4
sp. nov., sp. nov. and subsp. subsp. nov., isolated from different grass and corn silage.新种,新种和亚种亚种,分别从不同的草和玉米青贮中分离得到。
Int J Syst Evol Microbiol. 2024 Jul;74(7). doi: 10.1099/ijsem.0.006441.
5
sp. nov., isolated from the rhizosphere of rice and genome mining for the prediction of biosynthetic gene clusters.新种,从水稻根际分离得到,并进行基因组挖掘以预测生物合成基因簇。
Int J Syst Evol Microbiol. 2025 Feb;75(2). doi: 10.1099/ijsem.0.006687.
6
Phylotaxonomic analysis uncovers underestimated species diversity within the genus Rossellomorea with description of selenium-resistant Rossellomorea yichunensis sp. nov.系统分类学分析揭示了Rossellomorea属内被低估的物种多样性,并描述了耐硒的伊春Rossellomorea(Rossellomorea yichunensis)新物种。
BMC Microbiol. 2025 Jul 3;25(1):408. doi: 10.1186/s12866-025-04138-6.
7
Characterization of Jannaschia halovivens sp. nov., Isolated from Seawater.从海水中分离出的新物种嗜盐詹氏菌的特性描述
Curr Microbiol. 2025 Jul 2;82(8):358. doi: 10.1007/s00284-025-04331-w.
8
sp. nov., isolated from seawater, reclassification of as a later heterotypic synonym of , and emended description of Kim . 2013.sp. nov.,分离自海水,将 重新分类为 的晚异名同义名,以及 Kim 对 的描述的修订。2013 年。
Int J Syst Evol Microbiol. 2024 Sep;74(9). doi: 10.1099/ijsem.0.006526.
9
sp. nov., a novel bacterium, isolated from sea foam at Noto Peninsula, Ishikawa, Japan.新种,一种从日本石川县能登半岛的海沫中分离出的新型细菌。
Int J Syst Evol Microbiol. 2025 Jul;75(7). doi: 10.1099/ijsem.0.006828.
10
Macrococcus capreoli sp. nov., a new fosfomycin resistant species isolated from feces and nasal swabs of deer.山羊大球菌新种,一种从鹿的粪便和鼻拭子中分离出的对磷霉素耐药的新物种。
Syst Appl Microbiol. 2025 Jul;48(4):126620. doi: 10.1016/j.syapm.2025.126620. Epub 2025 May 23.

引用本文的文献

1
The Cœlomic Microbiota Among Three Echinoderms: The Black Sea Cucumber , the Sea Star and the Sea Urchin .三种棘皮动物的体腔微生物群:黑海参、海星和海胆
Biology (Basel). 2025 Apr 16;14(4):430. doi: 10.3390/biology14040430.

本文引用的文献

1
On the transformation of MinHash-based uncorrected distances into proper evolutionary distances for phylogenetic inference.基于 MinHash 的未校正距离向用于系统发育推断的恰当进化距离的转化。
F1000Res. 2020 Nov 10;9:1309. doi: 10.12688/f1000research.26930.1. eCollection 2020.
2
sp. nov., isolated from a tidal flat.sp. nov.,分离自潮汐滩。
Int J Syst Evol Microbiol. 2020 Dec;70(12):6301-6306. doi: 10.1099/ijsem.0.004532.
3
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.IQ-TREE 2:基因组时代系统发育推断的新模型和有效方法。
Mol Biol Evol. 2020 May 1;37(5):1530-1534. doi: 10.1093/molbev/msaa015.
4
Host-Microbe Coevolution: Applying Evidence from Model Systems to Complex Marine Invertebrate Holobionts.宿主-微生物协同进化:将模型系统中的证据应用于复杂海洋无脊椎动物全动物群。
mBio. 2019 Feb 5;10(1):e02241-18. doi: 10.1128/mBio.02241-18.
5
New insights into the haemo- and coelo-microbiota with antimicrobial activities from Echinodermata and Mollusca.棘皮动物和软体动物的血腔和体腔微生物群具有抗菌活性的新见解。
J Appl Microbiol. 2019 Apr;126(4):1023-1031. doi: 10.1111/jam.14184. Epub 2019 Jan 21.
6
Diversity and antimicrobial potential in sea anemone and holothurian microbiomes.海洋海葵和海参微生物组的多样性及其抗菌潜力。
PLoS One. 2018 May 9;13(5):e0196178. doi: 10.1371/journal.pone.0196178. eCollection 2018.
7
Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas.新种海盗假交替单胞菌,一种来自患病头状蔷薇珊瑚的出芽、具柄细菌,以及对假交替单胞菌属的修订描述
Int J Syst Evol Microbiol. 2017 Aug;67(8):2683-2688. doi: 10.1099/ijsem.0.001995. Epub 2017 Aug 18.
8
Physiological and genomic features of a novel violacein-producing bacterium isolated from surface seawater.从表层海水中分离出的一种新型产紫菌素细菌的生理和基因组特征
PLoS One. 2017 Jun 22;12(6):e0179997. doi: 10.1371/journal.pone.0179997. eCollection 2017.
9
FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program.FastME 2.0:一个全面、准确、快速的基于距离的系统发育推断程序。
Mol Biol Evol. 2015 Oct;32(10):2798-800. doi: 10.1093/molbev/msv150. Epub 2015 Jun 30.
10
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM:评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.