MacCabe A P, van Liempt H, Palissa H, Unkles S E, Riach M B, Pfeifer E, von Döhren H, Kinghorn J R
Molecular Genetics Unit, University of St. Andrews, Fife, United Kingdom.
J Biol Chem. 1991 Jul 5;266(19):12646-54.
The Aspergillus nidulans gene (acvA) encoding the first catalytic steps of penicillin biosynthesis that result in the formation of delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV), has been positively identified by matching a 15-amino acid segment of sequence obtained from an internal CNBr fragment of the purified amino-terminally blocked protein with that predicted from the DNA sequence. acvA is transcribed in the opposite orientation to ipnA (encoding isopenicillin N synthetase), with an intergenic region of 872 nucleotides. The gene has been completely sequenced at the nucleotide level and found to encode a protein of 3,770 amino acids (molecular mass, 422,486 Da). Both fast protein liquid chromatography and native gel estimates of molecular mass are consistent with this predicted molecular weight. The enzyme was identified as a glycoprotein by means of affinity blotting with concanavalin A. No evidence for the presence of introns within the acvA gene has been found. The derived amino acid sequence of ACV synthetase (ACVS) contains three homologous regions of about 585 residues, each of which displays areas of similarity with (i) adenylate-forming enzymes such as parsley 4-coumarate-CoA ligase and firefly luciferase and (ii) several multienzyme peptide synthetases, including bacterial gramicidin S synthetase 1 and tyrocidine synthetase 1. Despite these similarities, conserved cysteine residues found in the latter synthetases and thought to be essential for the thiotemplate mechanism of peptide biosynthesis have not been detected in the ACVS sequence. These observations, together with the occurrence of putative 4'-phosphopantetheine-attachment sites and a putative thioesterase site, are discussed with reference to the reaction sequence leading to production of the ACV tripeptide. We speculate that each of the homologous regions corresponds to a functional domain that recognizes one of the three substrate amino acids.
构巢曲霉中编码青霉素生物合成第一步催化反应的基因(acvA),该反应导致δ-(L-α-氨基己二酰基)-L-半胱氨酰-D-缬氨酸(ACV)的形成,已通过将从纯化的氨基末端封闭蛋白的内部溴化氰片段获得的15个氨基酸序列片段与DNA序列预测的序列进行匹配而得到肯定鉴定。acvA的转录方向与ipnA(编码异青霉素N合成酶)相反,基因间区域为872个核苷酸。该基因已在核苷酸水平上完全测序,发现编码一个由3770个氨基酸组成的蛋白质(分子量为422,486道尔顿)。快速蛋白质液相色谱法和天然凝胶对分子量的估计均与该预测分子量一致。通过伴刀豆球蛋白A亲和印迹法鉴定该酶为糖蛋白。未发现acvA基因内存在内含子的证据。推导的ACV合成酶(ACVS)氨基酸序列包含三个约585个残基的同源区域,每个区域都与以下物质显示出相似区域:(i)形成腺苷酸的酶,如欧芹4-香豆酸-CoA连接酶和萤火虫荧光素酶;(ii)几种多酶肽合成酶,包括细菌短杆菌肽S合成酶1和短杆菌酪肽合成酶1。尽管有这些相似性,但在ACVS序列中未检测到在后者合成酶中发现的、被认为对肽生物合成的硫酯模板机制至关重要的保守半胱氨酸残基。结合导致ACV三肽产生的反应序列,对这些观察结果以及假定的4'-磷酸泛酰巯基乙胺附着位点和假定的硫酯酶位点的存在进行了讨论。我们推测每个同源区域对应于一个识别三种底物氨基酸之一的功能域。