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本文引用的文献

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Streptococcus pneumoniae coinfection is correlated with the severity of H1N1 pandemic influenza.肺炎链球菌合并感染与 H1N1 大流行流感的严重程度相关。
PLoS One. 2009 Dec 31;4(12):e8540. doi: 10.1371/journal.pone.0008540.
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Digital transcriptome profiling using selective hexamer priming for cDNA synthesis.使用选择性六聚体引物进行cDNA合成的数字转录组分析。
Nat Methods. 2009 Sep;6(9):647-9. doi: 10.1038/nmeth.1360. Epub 2009 Aug 9.
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Discovery of swine as a host for the Reston ebolavirus.发现猪是雷斯顿埃博拉病毒的宿主。
Science. 2009 Jul 10;325(5937):204-6. doi: 10.1126/science.1172705.
4
Molecular characterization of human rhinovirus field strains isolated during surveillance of enteroviruses.肠道病毒监测期间分离的人鼻病毒野毒株的分子特征分析
J Gen Virol. 2009 Jun;90(Pt 6):1371-1381. doi: 10.1099/vir.0.008508-0. Epub 2009 Mar 4.
5
Human gut microbiota in obesity and after gastric bypass.肥胖及胃旁路术后的人体肠道微生物群
Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2365-70. doi: 10.1073/pnas.0812600106. Epub 2009 Jan 21.
6
Novel species of human rhinoviruses in acute otitis media.急性中耳炎中新型人类鼻病毒种类
Pediatr Infect Dis J. 2009 Jan;28(1):59-61. doi: 10.1097/INF.0b013e318182c90a.
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Novel borna virus in psittacine birds with proventricular dilatation disease.患有腺胃扩张病的鹦鹉体内的新型博尔纳病毒。
Emerg Infect Dis. 2008 Dec;14(12):1883-6. doi: 10.3201/eid1412.080984.
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Novel human rhinoviruses and exacerbation of asthma in children.新型人类鼻病毒与儿童哮喘加重
Emerg Infect Dis. 2008 Nov;14(11):1793-6. doi: 10.3201/eid1411.080386.

微生物狩猎。

Microbe hunting.

机构信息

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, 722 West 168th Street, New York, NY 10032, USA.

出版信息

Microbiol Mol Biol Rev. 2010 Sep;74(3):363-77. doi: 10.1128/MMBR.00007-10.

DOI:10.1128/MMBR.00007-10
PMID:20805403
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2937520/
Abstract

Platforms for pathogen discovery have improved since the days of Koch and Pasteur; nonetheless, the challenges of proving causation are at least as daunting as they were in the late 1800 s. Although we will almost certainly continue to accumulate low-hanging fruit, where simple relationships will be found between the presence of a cultivatable agent and a disease, these successes will be increasingly infrequent. The future of the field rests instead in our ability to follow footprints of infectious agents that cannot be characterized using classical microbiological techniques and to develop the laboratory and computational infrastructure required to dissect complex host-microbe interactions. I have tried to refine the criteria used by Koch and successors to prove linkage to disease. These refinements are working constructs that will continue to evolve in light of new technologies, new models, and new insights. What will endure is the excitement of the chase. Happy hunting!

摘要

自科赫和巴斯德时代以来,病原体发现的平台已经得到了改善;尽管如此,证明因果关系的挑战至少和 19 世纪末一样艰巨。尽管我们肯定会继续积累简单的关系,即在可培养的病原体存在与疾病之间找到简单的关系,但这些成功将越来越少。该领域的未来在于我们能够追踪无法使用经典微生物技术进行特征描述的传染性病原体的足迹,并开发出必要的实验室和计算基础设施来剖析复杂的宿主-微生物相互作用。我试图改进科赫及其后继者用来证明与疾病联系的标准。这些改进是工作结构,将根据新技术、新模型和新见解不断发展。持久的将是追逐的兴奋。狩猎愉快!