Korea Ocean Research & Development Institute, PO Box 29, Ansan 425-600, Korea.
Nature. 2010 Sep 16;467(7313):352-5. doi: 10.1038/nature09375.
Although a common reaction in anaerobic environments, the conversion of formate and water to bicarbonate and H(2) (with a change in Gibbs free energy of ΔG° = +1.3 kJ mol(-1)) has not been considered energetic enough to support growth of microorganisms. Recently, experimental evidence for growth on formate was reported for syntrophic communities of Moorella sp. strain AMP and a hydrogen-consuming Methanothermobacter species and of Desulfovibrio sp. strain G11 and Methanobrevibacter arboriphilus strain AZ. The basis of the sustainable growth of the formate-users is explained by H(2) consumption by the methanogens, which lowers the H(2) partial pressure, thus making the pathway exergonic. However, it has not been shown that a single strain can grow on formate by catalysing its conversion to bicarbonate and H(2). Here we report that several hyperthermophilic archaea belonging to the Thermococcus genus are capable of formate-oxidizing, H(2)-producing growth. The actual ΔG values for the formate metabolism are calculated to range between -8 and -20 kJ mol(-1) under the physiological conditions where Thermococcus onnurineus strain NA1 are grown. Furthermore, we detected ATP synthesis in the presence of formate as a sole energy source. Gene expression profiling and disruption identified the gene cluster encoding formate hydrogen lyase, cation/proton antiporter and formate transporter, which were responsible for the growth of T. onnurineus NA1 on formate. This work shows formate-driven growth by a single microorganism with protons as the electron acceptor, and reports the biochemical basis of this ability.
虽然在厌氧环境中是一种常见的反应,但将甲酸盐和水转化为碳酸氢盐和 H(2)(吉布斯自由能变化 ΔG° = +1.3 kJ mol(-1))的反应并没有被认为足以支持微生物的生长。最近,有实验证据表明,在 Moorella sp. strain AMP 和消耗氢气的 Methanothermobacter 物种以及 Desulfovibrio sp. strain G11 和 Methanobrevibacter arboriphilus strain AZ 的共培养物中,可以利用甲酸盐进行生长。甲酸盐利用者可持续生长的基础是产甲烷菌消耗氢气,降低了氢气的分压,从而使该途径成为放能反应。然而,尚未证明单个菌株可以通过催化甲酸盐转化为碳酸氢盐和 H(2)来生长。在这里,我们报告说,属于 Thermococcus 属的几种高温古菌能够进行甲酸盐氧化和 H(2)产生的生长。在 Thermococcus onnurineus strain NA1 生长的生理条件下,计算出甲酸盐代谢的实际 ΔG 值在-8 到-20 kJ mol(-1)之间。此外,我们在存在甲酸盐作为唯一能源的情况下检测到了 ATP 合成。基因表达谱分析和基因敲除确定了编码甲酸盐氢裂解酶、阳离子/质子反向转运体和甲酸盐转运体的基因簇,这些基因簇负责 T. onnurineus NA1 利用甲酸盐进行生长。这项工作表明,单个微生物可以利用质子作为电子受体进行甲酸盐驱动的生长,并报告了这种能力的生化基础。