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一个保守的茎环基序在 5'非翻译区调节转化生长因子-β(1)的翻译。

A conserved stem loop motif in the 5'untranslated region regulates transforming growth factor-β(1) translation.

机构信息

Institute of Nephrology, School of Medicine, Cardiff University, Heath Park, Cardiff, Wales, United Kingdom.

出版信息

PLoS One. 2010 Aug 26;5(8):e12283. doi: 10.1371/journal.pone.0012283.

DOI:10.1371/journal.pone.0012283
PMID:20865036
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2928724/
Abstract

Transforming growth factor-β(1) (TGF-β(1)) regulates cellular proliferation, differentiation, migration, and survival. The human TGF-β(1) transcript is inherently poorly translated, and translational activation has been documented in relation to several stimuli. In this paper, we have sought to identify in cis regulatory elements within the TGF-β(1) 5'Untranslated Region (5'UTR). In silico analysis predicted formation of stable secondary structure in a G/C-rich element between nucleotides +77 to +106, and demonstrated that this element is highly conserved across species. Circular dichroism spectroscopy confirmed the presence of secondary structure in this region. The proximal 5'UTR was inhibitory to translation in reporter gene experiments, and mutation of the secondary structure motif increased translational efficiency. Translational regulation of TGF-β(1) mRNA is linked to altered binding of YB-1 protein to its 5'UTR. Immunoprecipitation-RT-qPCR demonstrated a high basal association of YB-1 with TGF-β(1) mRNA. However, mutation of the secondary structure motif did not prevent interaction of YB-1 with the 5'UTR, suggesting that YB-1 binds to this region due to its G/C-rich composition, rather than a specific, sequence-dependent, binding site. These data identify a highly conserved element within the TGF-β(1) 5'UTR that forms stable secondary structure, and is responsible for the inherent low translation efficiency of this cytokine.

摘要

转化生长因子-β(1)(TGF-β(1)))调节细胞增殖、分化、迁移和存活。人类 TGF-β(1)转录本固有地翻译效率低,并且已经在与几种刺激相关的情况下记录了翻译激活。在本文中,我们试图在 TGF-β(1)5'非翻译区(5'UTR)内鉴定顺式调节元件。计算机分析预测在核苷酸+77 到+106 之间的 G/C 丰富元件中形成稳定的二级结构,并证明该元件在物种间高度保守。圆二色性光谱证实该区域存在二级结构。近端 5'UTR 在报告基因实验中对翻译具有抑制作用,并且二级结构模体的突变增加了翻译效率。TGF-β(1)mRNA 的翻译调节与 YB-1 蛋白与其 5'UTR 的结合改变有关。免疫沉淀-RT-qPCR 表明 YB-1 与 TGF-β(1)mRNA 的基础高结合。然而,二级结构模体的突变并没有阻止 YB-1 与 5'UTR 的相互作用,这表明 YB-1 由于其富含 G/C 的组成而结合到该区域,而不是特定的、序列依赖性的结合位点。这些数据确定了 TGF-β(1)5'UTR 内的一个高度保守的元件,该元件形成稳定的二级结构,是该细胞因子固有低翻译效率的原因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/64ba6ed61200/pone.0012283.g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/e0f0d2872fe5/pone.0012283.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/fe07e3675bdc/pone.0012283.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/6b7aa61e20db/pone.0012283.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/737ce9ac1c47/pone.0012283.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/e0f318a4267b/pone.0012283.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/4c39ef86a10d/pone.0012283.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/59ccf87b15ae/pone.0012283.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/7f88f1729711/pone.0012283.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/5894736f2a90/pone.0012283.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/64ba6ed61200/pone.0012283.g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/e0f0d2872fe5/pone.0012283.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/fe07e3675bdc/pone.0012283.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/6b7aa61e20db/pone.0012283.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/737ce9ac1c47/pone.0012283.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/e0f318a4267b/pone.0012283.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/4c39ef86a10d/pone.0012283.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/59ccf87b15ae/pone.0012283.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/7f88f1729711/pone.0012283.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/5894736f2a90/pone.0012283.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c2b/2928724/64ba6ed61200/pone.0012283.g010.jpg

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