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1
A system for the analysis of BKV non-coding control regions: application to clinical isolates from an HIV/AIDS patient.BKV 非编码控制区分析系统:在 HIV/AIDS 患者临床分离株中的应用。
Virology. 2010 Nov 25;407(2):368-73. doi: 10.1016/j.virol.2010.08.032. Epub 2010 Sep 24.
2
Functional analysis of polyomavirus BK non-coding control region quasispecies from kidney transplant recipients.肾移植受者多瘤病毒BK非编码控制区准种的功能分析
J Med Virol. 2009 Nov;81(11):1959-67. doi: 10.1002/jmv.21605.
3
Unique BK virus non-coding control region (NCCR) variants in hematopoietic stem cell transplant recipients with and without hemorrhagic cystitis.有或无出血性膀胱炎的造血干细胞移植受者中独特的BK病毒非编码控制区(NCCR)变异体
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Polyomavirus BK with rearranged noncoding control region emerge in vivo in renal transplant patients and increase viral replication and cytopathology.具有重排非编码控制区的多瘤病毒BK在肾移植患者体内出现,并增加病毒复制和细胞病理学变化。
J Exp Med. 2008 Apr 14;205(4):841-52. doi: 10.1084/jem.20072097. Epub 2008 Mar 17.
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Genetic variability in BK Virus regulatory regions in urine and kidney biopsies from renal-transplant patients.肾移植患者尿液和肾活检组织中BK病毒调控区的基因变异性。
J Med Virol. 2006 Mar;78(3):384-93. doi: 10.1002/jmv.20551.
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Identification of a unique BK virus variant in the CNS of a patient with AIDS.
J Med Virol. 2003 May;70(1):14-9. doi: 10.1002/jmv.10370.
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Recombined sequences between the non-coding control regions of JC and BK viruses found in the urine of a renal transplantation patient.在一名肾移植患者尿液中发现的JC病毒和BK病毒非编码控制区之间的重组序列。
Virus Genes. 2012 Dec;45(3):581-4. doi: 10.1007/s11262-012-0815-9. Epub 2012 Sep 5.
8
BK virus (BKV): infection, propagation, quantitation, purification, labeling, and analysis of cell entry.BK病毒(BKV):感染、增殖、定量、纯化、标记及细胞进入分析
Curr Protoc Cell Biol. 2009 Mar;Chapter 26:Unit 26.2. doi: 10.1002/0471143030.cb2602s42.
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Noncoding control region of naturally occurring BK virus variants: sequence comparison and functional analysis.自然发生的BK病毒变体的非编码控制区:序列比较与功能分析。
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Detection of BK virus and JC virus DNA in urine samples from immunocompromised (HIV-infected) and immunocompetent (HIV-non-infected) patients using polymerase chain reaction and microplate hybridisation.运用聚合酶链反应和微孔板杂交法检测免疫功能低下(感染HIV)和免疫功能正常(未感染HIV)患者尿液样本中的BK病毒和JC病毒DNA。
J Clin Virol. 2004 Apr;29(4):224-9. doi: 10.1016/S1386-6532(03)00155-0.

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Establishment of a Stable BK Polyomavirus-Secreting Cell Line: Characterization of Viral Genome Integration and Replication Dynamics Through Comprehensive Analysis.建立稳定分泌BK多瘤病毒的细胞系:通过综合分析对病毒基因组整合和复制动力学进行表征
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Tumor Necrosis Factor-Alpha Inhibits the Replication of Patient-Derived Archetype BK Polyomavirus While Activating Rearranged Strains.肿瘤坏死因子-α抑制患者来源的原型BK多瘤病毒的复制,同时激活重排毒株。
J Med Virol. 2025 Feb;97(2):e70210. doi: 10.1002/jmv.70210.
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BK polyomavirus: latency, reactivation, diseases and tumorigenesis.BK 多瘤病毒:潜伏、激活、疾病和肿瘤发生。
Front Cell Infect Microbiol. 2023 Sep 13;13:1263983. doi: 10.3389/fcimb.2023.1263983. eCollection 2023.
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A Cell Culture Model of BK Polyomavirus Persistence, Genome Recombination, and Reactivation.BK 多瘤病毒持续感染、基因组重组和激活的细胞培养模型。
mBio. 2021 Oct 26;12(5):e0235621. doi: 10.1128/mBio.02356-21. Epub 2021 Sep 2.
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Biology of Polyomavirus miRNA.多瘤病毒微小RNA的生物学特性
Front Microbiol. 2021 Apr 6;12:662892. doi: 10.3389/fmicb.2021.662892. eCollection 2021.
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Sirolimus and Other Mechanistic Target of Rapamycin Inhibitors Directly Activate Latent Pathogenic Human Polyomavirus Replication.西罗莫司和其他雷帕霉素靶蛋白抑制剂直接激活潜伏的致病性人类多瘤病毒复制。
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Human polyomavirus BKV infection of endothelial cells results in interferon pathway induction and persistence.人多瘤病毒 BKV 感染血管内皮细胞导致干扰素通路的诱导和持续。
PLoS Pathog. 2019 Jan 8;15(1):e1007505. doi: 10.1371/journal.ppat.1007505. eCollection 2019 Jan.
8
The prevalence and isolated subtypes of BK polyomavirus reactivation among patients infected with human immunodeficiency virus-1 in southeastern China.中国东南部人类免疫缺陷病毒1型感染患者中BK多瘤病毒再激活的患病率及分离亚型
Arch Virol. 2018 Jun;163(6):1463-1468. doi: 10.1007/s00705-018-3724-y. Epub 2018 Feb 12.
9
Fate of the Urinary Tract Virus BK Human Polyomavirus in Source-Separated Urine.分离尿液源中 BK 人类多瘤病毒的尿路上皮病毒归宿。
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Biology of the BKPyV: An Update.BKPyV 的生物学特性:最新研究进展。
Viruses. 2017 Nov 3;9(11):327. doi: 10.3390/v9110327.

本文引用的文献

1
BK virus has tropism for human salivary gland cells in vitro: implications for transmission.BK病毒在体外对人唾液腺细胞具有嗜性:对传播的影响。
Virology. 2009 Nov 25;394(2):183-93. doi: 10.1016/j.virol.2009.07.022. Epub 2009 Sep 25.
2
Functional analysis of polyomavirus BK non-coding control region quasispecies from kidney transplant recipients.肾移植受者多瘤病毒BK非编码控制区准种的功能分析
J Med Virol. 2009 Nov;81(11):1959-67. doi: 10.1002/jmv.21605.
3
Polyomavirus shedding in the stool of healthy adults.健康成年人粪便中的多瘤病毒排出情况。
J Clin Microbiol. 2009 Aug;47(8):2388-91. doi: 10.1128/JCM.02472-08. Epub 2009 Jun 3.
4
Seroepidemiology of human polyomaviruses.人类多瘤病毒的血清流行病学
PLoS Pathog. 2009 Mar;5(3):e1000363. doi: 10.1371/journal.ppat.1000363. Epub 2009 Mar 27.
5
High frequency of polyoma BK virus shedding in the gastrointestinal tract after hematopoietic stem cell transplantation: a prospective and quantitative analysis.造血干细胞移植后胃肠道中多瘤BK病毒脱落的高频率:一项前瞻性定量分析。
Bone Marrow Transplant. 2009 Jan;43(1):43-7. doi: 10.1038/bmt.2008.266. Epub 2008 Oct 6.
6
Transforming growth factor-beta-mediated regulation of BK virus gene expression.转化生长因子-β介导的BK病毒基因表达调控
Virology. 2008 Aug 15;378(1):6-12. doi: 10.1016/j.virol.2008.05.009. Epub 2008 Jun 17.
7
Polyomavirus BK with rearranged noncoding control region emerge in vivo in renal transplant patients and increase viral replication and cytopathology.具有重排非编码控制区的多瘤病毒BK在肾移植患者体内出现,并增加病毒复制和细胞病理学变化。
J Exp Med. 2008 Apr 14;205(4):841-52. doi: 10.1084/jem.20072097. Epub 2008 Mar 17.
8
Relationships between BK virus lineages and human populations.BK病毒谱系与人类群体之间的关系。
Microbes Infect. 2007 Feb;9(2):204-13. doi: 10.1016/j.micinf.2006.11.008. Epub 2006 Dec 8.
9
Inhibitory effect of gamma interferon on BK virus gene expression and replication.γ干扰素对BK病毒基因表达和复制的抑制作用。
J Virol. 2007 Jan;81(1):272-9. doi: 10.1128/JVI.01571-06. Epub 2006 Oct 11.
10
Activation of early gene transcription in polyomavirus BK by human immunodeficiency virus type 1 Tat.1型人类免疫缺陷病毒Tat蛋白对多瘤病毒BK早期基因转录的激活作用
J Gen Virol. 2006 Jun;87(Pt 6):1557-1566. doi: 10.1099/vir.0.81569-0.

BKV 非编码控制区分析系统:在 HIV/AIDS 患者临床分离株中的应用。

A system for the analysis of BKV non-coding control regions: application to clinical isolates from an HIV/AIDS patient.

机构信息

Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109-5620, USA.

出版信息

Virology. 2010 Nov 25;407(2):368-73. doi: 10.1016/j.virol.2010.08.032. Epub 2010 Sep 24.

DOI:10.1016/j.virol.2010.08.032
PMID:20869740
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2957895/
Abstract

The human polyomavirus BK virus (BKV) is an important opportunistic pathogen whose disease prevalence continues to increase with the growing immunocompromised population. To date, the major determinant of replication in cell culture has not been formally proven. BKV exists as archetype virus and rearranged variants, which are classified based on the DNA sequence of their non-coding control regions (NCCRs). The archetype BKV NCCR is divided into five blocks of sequence and rearranged variants contain deletions and duplications of these blocks. In this study, a genetic system was developed and used to identify the major determinant of replication ability in primary renal proximal tubule epithelial cells, the natural host cell of BKV. This system was also used to analyze NCCR variants isolated from an immunocompromised patient which contain assorted rearrangement patterns and functional differences. This study solidifies the NCCR as the major genetic determinant of BKV replication ability in vitro.

摘要

人类多瘤病毒 BK 病毒(BKV)是一种重要的机会性病原体,其疾病流行率随着免疫功能低下人群的增加而持续上升。迄今为止,尚未正式证明细胞培养中复制的主要决定因素。BKV 存在原始病毒和重排变体,根据其非编码控制区(NCCR)的 DNA 序列进行分类。原始 BKV NCCR 分为五个序列块,重排变体包含这些块的缺失和重复。在这项研究中,开发并使用了一种遗传系统来鉴定原发性肾近端小管上皮细胞(BKV 的天然宿主细胞)中复制能力的主要决定因素。该系统还用于分析来自免疫功能低下患者的 NCCR 变体,这些变体包含各种重排模式和功能差异。这项研究将 NCCR 确定为 BKV 体外复制能力的主要遗传决定因素。