Instituto de Investigaciones en Ingeniería Genética y Biología Molecular (INGEBI-CONICET), Buenos Aires, Argentina.
Microb Ecol. 2011 Apr;61(3):486-95. doi: 10.1007/s00248-010-9762-y. Epub 2010 Oct 23.
Understanding the processes that generate patterns of community structure is a central focus of ecological research. With that aim, we manipulated the structure of bacterial activated sludge to test the influence of the species richness and composition of bacterial communities on the dynamics of activated sludge floc assembly in lab-scale bioreactors. Bacterial community structure was analyzed using denaturing gradient gel electrophoresis of RT-PCR amplified 16S rRNA. Fingerprinting of four parallel reactors, started with the same source communities added in different proportions, converged to patterns that were more similar than expected by chance, suggesting a deterministic selection in floc development. Evidence for neutral dynamics was suggested by the dependence of the rate of replacement of species (bacterial taxa-time relationships) on the number of available species in the source community. Further indication of stochastic dynamics was obtained by the application of the Sloan neutral model for prokaryotes. The fitting of the observed data to the model predictions revealed that the importance of the stochastic component increased with the size of the reservoir of species richness from which the community is drawn. Taken together, the results illustrate how both neutral and deterministic dynamics operate simultaneously in the assembly of the bacterial floc and show that the balance of the two depends on the richness of the source community.
理解产生群落结构模式的过程是生态研究的一个核心焦点。为此,我们操纵细菌活性污泥的结构,以测试细菌群落的物种丰富度和组成对实验室规模生物反应器中活性污泥絮体组装动力学的影响。使用 RT-PCR 扩增的 16S rRNA 的变性梯度凝胶电泳分析细菌群落结构。对四个平行反应器的指纹图谱分析表明,起始于不同比例添加的相同源群落的反应器趋于更相似的模式,这表明絮体发育中存在确定性选择。物种替代率(细菌分类单元-时间关系)对源群落中可用物种数量的依赖性表明了中性动态的证据。通过应用用于原核生物的 Sloan 中性模型获得了随机动态的进一步指示。观察数据与模型预测的拟合表明,随着从群落中提取的物种丰富度库的大小的增加,随机成分的重要性增加。总的来说,这些结果说明了中性和确定性动态如何同时在细菌絮体的组装中起作用,并表明这两种动态的平衡取决于源群落的丰富度。