• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

中华绒螯蟹线粒体控制区结构及其串联重复序列(VNTRs)的多态性

Structure and variable numbers of tandem repeats (VNTRs) of the mitochondrial control region in mitten crab Eriocheir (Crustacean: Brachyura).

机构信息

Jiangsu Provincial Key Laboratory of Coastal Wetland Bioresources and Environmental Protection, Yancheng Normal University, Yancheng 224051, Jiangsu, China.

出版信息

Mol Biol Rep. 2011 Nov;38(8):4935-40. doi: 10.1007/s11033-010-0636-7. Epub 2010 Dec 14.

DOI:10.1007/s11033-010-0636-7
PMID:21153766
Abstract

Mitochondrial control region was called "A + T-rich" region in invertebrate. In the study, the general organization of control region in mitten crab was divided into two major domains: high variable segment and conserved segment. Four conserved blocks (CSB1, CSB2, CSB3 and CSB4) and two tandem repeat sequences (RT1 and RT2) were defined in control region. There were 116 polymorphic sites and 84 parsimony information sites in 571 aligned sites of the high variable segment adjacent "tRNA-Gln", in which 58 stable variable sites were defined between E. j. sinensis and E. j. hepuensis. Conserved domain contained more than two similar repeat units, and length polymorphism of control region was due to the number difference between the two repeat units (RT1 and RT2). And length polymorphism was a common phenomenon for tandem repeat in control region in the study. Furthermore, a novel result showed the core nucleotide of RT2 in control region tandem repeat was C in E. j. hepuensis, but G in E. j. sinensis. It might be a rapid and cost-effective measure of seedlings differentiation in aquaculture.

摘要

线粒体控制区在无脊椎动物中被称为“富含 A+T”区。在本研究中,中华绒螯蟹的控制区总体结构被划分为两个主要区域:高变区和保守区。控制区中定义了四个保守区(CSB1、CSB2、CSB3 和 CSB4)和两个串联重复序列(RT1 和 RT2)。在相邻“tRNA-Gln”的高变区 571 个对齐位点中,有 116 个多态性位点和 84 个简约信息位点,其中中华绒螯蟹和日本绒螯蟹之间定义了 58 个稳定可变位点。保守区包含两个以上相似的重复单元,控制区的长度多态性是由于两个重复单元(RT1 和 RT2)之间的数量差异所致。而且,在本研究中,串联重复的控制区长度多态性是一个常见现象。此外,一个新的结果表明,控制区串联重复 RT2 的核心核苷酸在日本绒螯蟹中是 C,而在中国绒螯蟹中是 G。这可能是水产养殖中苗种分化的一种快速、经济有效的衡量标准。

相似文献

1
Structure and variable numbers of tandem repeats (VNTRs) of the mitochondrial control region in mitten crab Eriocheir (Crustacean: Brachyura).中华绒螯蟹线粒体控制区结构及其串联重复序列(VNTRs)的多态性
Mol Biol Rep. 2011 Nov;38(8):4935-40. doi: 10.1007/s11033-010-0636-7. Epub 2010 Dec 14.
2
Complete mitochondrial genomes of three mitten crabs, Eriocheir sinensis, E. hepuensis, and E. japonica.中华绒螯蟹、合浦绒螯蟹和日本绒螯蟹三种绒螯蟹的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1175-6. doi: 10.3109/19401736.2014.936425. Epub 2014 Jul 10.
3
Sixteen polymorphic simple sequence repeat markers from expressed sequence tags of the Chinese Mitten Crab Eriocheir sinensis.中华绒螯蟹表达序列标签中的16个多态性简单序列重复标记。
Int J Mol Sci. 2010 Aug 24;11(8):3035-8. doi: 10.3390/ijms11083035.
4
Genetic diversity and genetic structure of farmed and wild Chinese mitten crab (Eriocheir sinensis) populations from three major basins by mitochondrial DNA COI and Cyt b gene sequences.基于线粒体DNA COI和Cyt b基因序列对来自三大流域的养殖和野生中华绒螯蟹(Eriocheir sinensis)种群的遗传多样性和遗传结构研究
Mitochondrial DNA A DNA Mapp Seq Anal. 2018 Oct;29(7):1081-1089. doi: 10.1080/24701394.2017.1404048. Epub 2017 Nov 20.
5
Characterization of two C-type lectin-like domain (CTLD)-containing proteins from the cDNA library of Chinese mitten crab Eriocheir sinensis.中国绒螯蟹 cDNA 文库中两种含 C 型凝集素样结构域(CTLD)蛋白的特性分析。
Fish Shellfish Immunol. 2011 Feb;30(2):515-24. doi: 10.1016/j.fsi.2010.11.027. Epub 2010 Dec 4.
6
Identification and characterization of thirty novel microsatellite DNA markers from the Chinese mitten crab Eriocheir sinensis expressed sequence tags.从中华绒螯蟹表达序列标签中鉴定和表征三十个新型微卫星DNA标记。
BMC Res Notes. 2016 Feb 17;9:105. doi: 10.1186/s13104-016-1909-6.
7
Molecular cloning, characterization, expression and activity analysis of cathepsin L in Chinese mitten crab, Eriocheir sinensis.中华绒螯蟹组织蛋白酶 L 的基因克隆、特征分析、表达和活性分析。
Fish Shellfish Immunol. 2010 Dec;29(6):1010-8. doi: 10.1016/j.fsi.2010.08.007. Epub 2010 Aug 21.
8
Identification and analysis of the complete mitochondrial genome sequence of Eriocheir sinensis.中华绒螯蟹线粒体全基因组序列的鉴定与分析
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):3923-3924. doi: 10.3109/19401736.2014.987267. Epub 2014 Dec 9.
9
Mitochondrial DNA-inferred population structure and demographic history of the mitten crab (Eriocheir sensu stricto) found along the coast of mainland China.基于线粒体DNA推断的中国沿海中华绒螯蟹(狭义绒螯蟹属)的种群结构和种群历史。
Mol Ecol. 2008 Aug;17(15):3515-27. doi: 10.1111/j.1365-294x.2008.03850.x.
10
Slipped-strand mispairing at noncontiguous repeats in Poecilia reticulata: a model for minisatellite birth.孔雀鱼非连续重复序列处的滑链错配:一种微卫星产生的模型
Genetics. 2000 Jul;155(3):1313-20. doi: 10.1093/genetics/155.3.1313.

引用本文的文献

1
Mitogenomic Features and Evolution of the Nile River Dominant Tilapiine Species (Perciformes: Cichlidae).尼罗河流域优势罗非鱼种类(鲈形目:丽鱼科)的线粒体基因组特征与进化
Biology (Basel). 2022 Dec 26;12(1):40. doi: 10.3390/biology12010040.

本文引用的文献

1
Identification and characteristics of a novel gene, EJO1, in the Chinese mitten crab (Eriocheir japonica sinensis) ovary.鉴定并分析中华绒螯蟹(Eriocheir japonica sinensis)卵巢中一个新型基因 EJO1 的特征。
Mol Biol Rep. 2010 Jul;37(6):2587-92. doi: 10.1007/s11033-009-9778-x. Epub 2009 Sep 2.
2
Molecular cloning of cyclin B transcript with an unusually long 3' untranslation region and its expression analysis during oogenesis in the Chinese mitten crab, Eriocheir sinensis.中华绒螯蟹中具有异常长3'非翻译区的细胞周期蛋白B转录本的分子克隆及其在卵子发生过程中的表达分析
Mol Biol Rep. 2009 Jul;36(6):1521-9. doi: 10.1007/s11033-008-9346-9. Epub 2008 Aug 28.
3
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
MEGA4:分子进化遗传学分析(MEGA)软件版本4.0。
Mol Biol Evol. 2007 Aug;24(8):1596-9. doi: 10.1093/molbev/msm092. Epub 2007 May 7.
4
Extensive variation and heteroplasmy in size of mitochondrial DNA among geographic populations of Drosophila melanogaster.黑腹果蝇地理种群中线粒体 DNA 大小的广泛变异和异质性。
Proc Natl Acad Sci U S A. 1986 Nov;83(22):8813-7. doi: 10.1073/pnas.83.22.8813.
5
The mitochondrial genome of the Japanese freshwater crab, Geothelphusa dehaani (Crustacea: Brachyura): evidence for its evolution via gene duplication.日本淡水蟹(Geothelphusa dehaani,甲壳纲:短尾次目)的线粒体基因组:通过基因复制进行进化的证据
Gene. 2005 Aug 1;355:28-39. doi: 10.1016/j.gene.2005.05.020.
6
Mitochondrial genome of the Chinese mitten crab Eriocheir japonica sinenesis (Brachyura: Thoracotremata: Grapsoidea) reveals a novel gene order and two target regions of gene rearrangements.中华绒螯蟹(十足目:胸孔亚派:方蟹总科)线粒体基因组揭示了一种新的基因排列顺序和两个基因重排的目标区域。
Gene. 2005 Apr 11;349:207-17. doi: 10.1016/j.gene.2004.12.036.
7
Disparate patterns of population genetic structure and population history in two sympatric penaeid shrimp species (Farfantepenaeus aztecus and Litopenaeus setiferus) in the eastern United States.美国东部两种同域分布的对虾物种(墨西哥棕虾和白对虾)不同的种群遗传结构模式和种群历史
Mol Ecol. 2003 Nov;12(11):2895-905. doi: 10.1046/j.1365-294x.2003.01955.x.
8
Molecular systematics of the Asian mitten crabs, genus Eriocheir (Crustacea: Brachyura).绒螯蟹属(甲壳纲:短尾亚目)亚洲绒螯蟹的分子系统学
Mol Phylogenet Evol. 2003 Nov;29(2):309-16. doi: 10.1016/s1055-7903(03)00112-x.
9
Structure and evolution of the mitochondrial control region of leaf beetles (Coleoptera: Chrysomelidae): a hierarchical analysis of nucleotide sequence variation.叶甲线粒体控制区的结构与进化(鞘翅目:叶甲科):核苷酸序列变异的层次分析
J Mol Evol. 2003 Jan;56(1):38-45. doi: 10.1007/s00239-002-2378-1.
10
Complete mitochondrial DNA sequence of the Japanese spiny lobster, Panulirus japonicus (Crustacea: Decapoda).日本龙虾(Panulirus japonicus)(甲壳纲:十足目)的线粒体DNA全序列
Gene. 2002 Jul 24;295(1):89-96. doi: 10.1016/s0378-1119(02)00824-7.