• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大肠杆菌中基因表达的持续合成错误。

Processivity errors of gene expression in Escherichia coli.

作者信息

Jørgensen F, Kurland C G

机构信息

Department of Molecular Biology, University of Uppsala, Sweden.

出版信息

J Mol Biol. 1990 Oct 20;215(4):511-21. doi: 10.1016/S0022-2836(05)80164-0.

DOI:10.1016/S0022-2836(05)80164-0
PMID:2121997
Abstract

Not all ribosomes that initiate translation of an mRNA sequence will successfully complete it and produce a full-length protein product. By comparing the amounts of lacZ monomer and lacZ dimer protein expressed from a plasmid in a strictly controlled assay, we calculate a dimer to monomer ratio of 0.76. We interpret this to mean that ribosomes have a 76% chance of completing the synthesis of a beta-galactosidase polypeptide. The remaining 24% of the initiated chains end in processivity accidents. For the wild-type, premature RNA polymerase termination is found to account for roughly one-third of the processivity accidents. For the hyperaccurate SmP mutant, we observe a processivity of 0.28, but the presence of streptomycin improves this to 0.50. Thus, the hyperaccuracy with respect to missense substitutions for this mutant is accompanied by a reduced processivity. Addition of streptomycin increase the first error class and reduces the second one. This finding is relevant to the optimization of ribosome function and the growth performance of ribosome mutants.

摘要

并非所有起始翻译mRNA序列的核糖体都能成功完成翻译并产生全长蛋白质产物。通过在严格控制的实验中比较从质粒表达的lacZ单体和lacZ二聚体蛋白的量,我们计算出二聚体与单体的比例为0.76。我们将此解释为核糖体有76%的机会完成β-半乳糖苷酶多肽的合成。其余24%起始的链在持续合成过程中发生意外终止。对于野生型,发现RNA聚合酶过早终止约占持续合成意外的三分之一。对于超精确的SmP突变体,我们观察到其持续合成率为0.28,但链霉素的存在将此提高到0.50。因此,该突变体在错义替换方面的超精确性伴随着持续合成率的降低。添加链霉素增加了第一类错误并减少了第二类错误。这一发现与核糖体功能的优化以及核糖体突变体的生长性能相关。

相似文献

1
Processivity errors of gene expression in Escherichia coli.大肠杆菌中基因表达的持续合成错误。
J Mol Biol. 1990 Oct 20;215(4):511-21. doi: 10.1016/S0022-2836(05)80164-0.
2
Ribosome mutants with altered accuracy translate with reduced processivity.准确性改变的核糖体突变体在翻译时延伸能力降低。
J Mol Biol. 1995 May 5;248(3):551-61. doi: 10.1006/jmbi.1995.0242.
3
The low expression level of pokeweed antiviral protein (PAP) gene in Escherichia coli by the inducible lac promoter is due to inefficient transcription and translation and not to the toxicity of the PAP.通过诱导型乳糖启动子在大肠杆菌中表达的商陆抗病毒蛋白(PAP)基因水平较低,这是由于转录和翻译效率低下,而非PAP的毒性所致。
Arch Biochem Biophys. 1998 Mar 1;351(1):82-8. doi: 10.1006/abbi.1997.0552.
4
Coupling of rRNA transcription and ribosomal assembly in vivo. Formation of active ribosomal subunits in Escherichia coli requires transcription of rRNA genes by host RNA polymerase which cannot be replaced by bacteriophage T7 RNA polymerase.体内rRNA转录与核糖体组装的偶联。在大肠杆菌中形成活性核糖体亚基需要宿主RNA聚合酶转录rRNA基因,而噬菌体T7 RNA聚合酶无法替代宿主RNA聚合酶。
J Mol Biol. 1993 Jun 5;231(3):581-93. doi: 10.1006/jmbi.1993.1311.
5
Some base substitutions in the leader of an Escherichia coli ribosomal RNA operon affect the structure and function of ribosomes. Evidence for a transient scaffold function of the rRNA leader.大肠杆菌核糖体RNA操纵子前导序列中的一些碱基替换会影响核糖体的结构和功能。rRNA前导序列具有瞬时支架功能的证据。
J Mol Biol. 1993 Sep 20;233(2):203-18. doi: 10.1006/jmbi.1993.1500.
6
[Location of the initiating codon AUG in relation to the 5'-end of mRNA mediates the effectiveness of translation in E. coli cells].[起始密码子AUG相对于mRNA 5'端的位置介导了大肠杆菌细胞中的翻译效率]
Bioorg Khim. 1988 Oct;14(10):1387-92.
7
[Effect of the length of the loop segment of local mRNA secondary structure in the region of lacZ gene translation initiation on its expression].[lacZ基因翻译起始区域局部mRNA二级结构的环段长度对其表达的影响]
Mol Gen Mikrobiol Virusol. 1996 Jan-Mar(1):28-32.
8
Activities of constitutive promoters in Escherichia coli.大肠杆菌中组成型启动子的活性。
J Mol Biol. 1999 Sep 10;292(1):19-37. doi: 10.1006/jmbi.1999.3056.
9
Construction and characterization of a specialized ribosome system for the overproduction of proteins in Escherichia coli.用于在大肠杆菌中过量生产蛋白质的特殊核糖体系统的构建与表征
Biotechnol Prog. 1993 Jul-Aug;9(4):345-54. doi: 10.1021/bp00022a001.
10
The low processivity of T7 RNA polymerase over the initially transcribed sequence can limit productive initiation in vivo.T7 RNA聚合酶在最初转录序列上的低持续合成能力可能会限制体内的有效起始。
J Mol Biol. 1997 May 30;269(1):41-51. doi: 10.1006/jmbi.1997.1039.

引用本文的文献

1
Screening and Molecular Dynamics Simulations of Small Molecules Targeting Peptidyl tRNA Hydrolase for Drug-Resistant Tuberculosis.针对耐多药结核病的肽基-tRNA水解酶小分子的筛选及分子动力学模拟
ACS Omega. 2025 Aug 14;10(33):37115-37127. doi: 10.1021/acsomega.5c01747. eCollection 2025 Aug 26.
2
A data-driven estimation of the ribosome drop-off rate in reveals a correlation with the genes length.对核糖体脱落率的一种数据驱动估计表明其与基因长度存在相关性。 (你提供的原文“A data-driven estimation of the ribosome drop-off rate in reveals a correlation with the genes length.”中“in”后面似乎缺少内容,请确认是否完整准确。)
NAR Genom Bioinform. 2024 Apr 18;6(2):lqae036. doi: 10.1093/nargab/lqae036. eCollection 2024 Jun.
3
Phenotypic mutations contribute to protein diversity and shape protein evolution.
表型突变有助于蛋白质多样性,并塑造蛋白质进化。
Protein Sci. 2022 Sep;31(9):e4397. doi: 10.1002/pro.4397.
4
Genome Expansion by tRNA +1 Frameshifting at Quadruplet Codons.基因组通过 tRNA +1 框架移位在四联体密码子处扩展。
J Mol Biol. 2022 Apr 30;434(8):167440. doi: 10.1016/j.jmb.2021.167440. Epub 2022 Jan 4.
5
Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.EF-G 催化转位过程中+1 核糖体移码的结构基础。
Nat Commun. 2021 Jul 30;12(1):4644. doi: 10.1038/s41467-021-24911-1.
6
Natural Product Inhibition and Enzyme Kinetics Related to Phylogenetic Characterization for Bacterial Peptidyl-tRNA Hydrolase 1.天然产物抑制和酶动力学与细菌肽基-tRNA 水解酶 1 的系统发育特征有关。
Molecules. 2021 Apr 15;26(8):2281. doi: 10.3390/molecules26082281.
7
In vitro synthesis of 32 translation-factor proteins from a single template reveals impaired ribosomal processivity.从单个模板体外合成 32 种翻译因子蛋白,揭示了核糖体的进行性降低。
Sci Rep. 2021 Jan 21;11(1):1898. doi: 10.1038/s41598-020-80827-8.
8
The nature of the purine at position 34 in tRNAs of 4-codon boxes is correlated with nucleotides at positions 32 and 38 to maintain decoding fidelity.在四密码子盒的 tRNA 中,第 34 位嘌呤的性质与第 32 和 38 位核苷酸相关,以维持解码的保真度。
Nucleic Acids Res. 2020 Jun 19;48(11):6170-6183. doi: 10.1093/nar/gkaa221.
9
The energy landscape of -1 ribosomal frameshifting.-1 核糖体移码的能量景观。
Sci Adv. 2020 Jan 1;6(1):eaax6969. doi: 10.1126/sciadv.aax6969. eCollection 2020 Jan.
10
Codon-Specific Translation by mG37 Methylation of tRNA.通过tRNA的mG37甲基化实现密码子特异性翻译。
Front Genet. 2019 Jan 10;9:713. doi: 10.3389/fgene.2018.00713. eCollection 2018.