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肌动蛋白及其他聚合物中细丝长度波动的理论分析。

A theoretical analysis of filament length fluctuations in actin and other polymers.

作者信息

Hu Jifeng, Othmer Hans G

机构信息

School of Mathematics, University of Minnesota, Minneapolis, MN 55455, USA.

出版信息

J Math Biol. 2011 Dec;63(6):1001-49. doi: 10.1007/s00285-010-0400-6. Epub 2011 Jan 14.

Abstract

Control of the structure and dynamics of the actin cytoskeleton is essential for cell motility and for maintaining the structural integrity of cells. Central to understanding the control of these features is an understanding of the dynamics of actin filaments, first as isolated filaments, then as integrated networks, and finally as networks containing higher-order structures such as bundles, stress fibers and acto-myosin complexes. It is known experimentally that single filaments can exhibit large fluctuations, but a detailed understanding of the transient dynamics involved is still lacking. Here we first study stochastic models of a general system involving two-monomer types that can be analyzed completely, and then we report stochastic simulations on the complete actin model with three monomer types. We systematically examine the transient behavior of filament length dynamics so as to gain a better understanding of the time scales involved in reaching a steady state. We predict the lifetime of a cap of one monomer type and obtain the mean and variance of the survival time of a cap at the filament end, which together determine the filament length fluctuations.

摘要

肌动蛋白细胞骨架的结构和动力学控制对于细胞运动以及维持细胞的结构完整性至关重要。理解这些特征控制的核心在于理解肌动蛋白丝的动力学,首先是孤立的肌动蛋白丝,然后是整合的网络,最后是包含诸如束状结构、应力纤维和肌动蛋白-肌球蛋白复合物等高阶结构的网络。实验表明单根肌动蛋白丝会表现出大幅波动,但对其中涉及的瞬态动力学仍缺乏详细了解。在此,我们首先研究一个涉及两种单体类型的通用系统的随机模型,该模型可进行全面分析,然后报告对具有三种单体类型的完整肌动蛋白模型的随机模拟。我们系统地研究肌动蛋白丝长度动力学的瞬态行为,以便更好地理解达到稳态所涉及的时间尺度。我们预测一种单体类型帽的寿命,并获得肌动蛋白丝末端帽存活时间的均值和方差,它们共同决定了肌动蛋白丝长度的波动。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff18/3099255/5042b898496e/nihms267345f1.jpg

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本文引用的文献

1
How cofilin severs an actin filament.丝切蛋白如何切断肌动蛋白丝。
Biophys Rev. 2009 May 15;1(2):51-59. doi: 10.1007/s12551-009-0008-5.
2
Actin in dendritic spines: connecting dynamics to function.肌动蛋白在树突棘中的作用:连接动力学与功能。
J Cell Biol. 2010 May 17;189(4):619-29. doi: 10.1083/jcb.201003008. Epub 2010 May 10.
4
Control of actin filament treadmilling in cell motility.细胞运动中肌动蛋白丝的 treadmilling 控制。
Annu Rev Biophys. 2010;39:449-70. doi: 10.1146/annurev-biophys-051309-103849.

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