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使用两种贝叶斯聚类方法进行微卫星分析揭示的爱沙尼亚灰牛的遗传成分

Genetic components of grey cattle in Estonia as revealed by microsatellite analysis using two Bayesian clustering methods.

作者信息

Li Meng-Hua, Kantanen Juha, Michelson Annika, Saarma Urmas

机构信息

Biotechnology and Food Research, MTT Agrifood Research Finland, FI-31600 Jokioinen, Finland.

出版信息

BMC Res Notes. 2011 Feb 11;4:37. doi: 10.1186/1756-0500-4-37.

Abstract

BACKGROUND

It was recently postulated that a few individual grey cattle still found in Estonia might be a relict of the old native cattle stock. Genotypes at 17 microsatellite loci from a total of 243 cattle from North European breeds and 11 grey cattle in Estonia were used in an attempt to clarify the genetic composition of the grey cattle.

FINDINGS

We characterize the genetic components of 11 examples of the grey cattle in Estonia at the population and individual levels. Our results show that the grey cattle in Estonia are most genetically similar to the Holstein-Friesian breed and secondarily to the Estonian Red cattle.

CONCLUSIONS

Both Bayesian approaches gave similar results in terms of the identification of numbers of clusters and the estimation of proportions of genetic components. This study suggested that the Estonian grey cattle included in the analysis are a genetic composite resulting from cross-breeding of European dairy breeds.

摘要

背景

最近有人推测,在爱沙尼亚仍能找到的少数几头灰色牛可能是古老本地牛群的残余。来自北欧品种的总共243头牛和爱沙尼亚的11头灰色牛的17个微卫星位点的基因型被用于试图阐明灰色牛的遗传组成。

研究结果

我们在群体和个体水平上对爱沙尼亚11头灰色牛样本的遗传成分进行了表征。我们的结果表明,爱沙尼亚的灰色牛在基因上与荷斯坦-弗里生品种最为相似,其次与爱沙尼亚红牛相似。

结论

两种贝叶斯方法在聚类数量的识别和遗传成分比例的估计方面给出了相似的结果。这项研究表明,分析中所包含的爱沙尼亚灰色牛是欧洲奶牛品种杂交产生的遗传复合体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dde/3045957/8e2dd11f291f/1756-0500-4-37-1.jpg

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