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关于“组学”的未来:脂质组学。

On the future of "omics": lipidomics.

机构信息

Institute of Mass Spectrometry, School of Medicine, Grove Building, Swansea University, Singleton Park, Swansea SA2 8PP, UK.

出版信息

J Inherit Metab Dis. 2011 Jun;34(3):583-92. doi: 10.1007/s10545-010-9274-4. Epub 2011 Feb 12.

Abstract

Following in the wake of the genomic and proteomic revolutions new fields of "omics" research are emerging. The metabolome provides the natural complement to the genome and proteome, however, the extreme physicochemical diversity of the metabolome leads to a subdivision of metabolites into compounds soluble in aqueous solutions or those soluble in organic solvents. A complete molecular and quantitative investigation of the latter when isolated from tissue, fluid or cells constitutes lipidomics. Like proteomics, lipidomics is a subject which is both technology driven and technology driving, with the primary technologies being mass spectrometry, with or without on-line chromatography and computer-assisted data analysis. In this paper we will examine the underlying fundamentals of different lipidomic experimental approaches including the "shotgun" and "top-down" global approaches, and the more targeted liquid chromatography - or gas chromatography - mass spectrometry approaches. Application of these approaches to the identification of in-born errors of metabolism will be discussed.

摘要

在基因组学和蛋白质组学革命之后,新的“组学”研究领域正在出现。代谢组学为基因组和蛋白质组提供了自然的补充,然而,代谢组的极端物理化学多样性导致代谢物分为可溶于水溶液的化合物和可溶于有机溶剂的化合物。当从组织、液体或细胞中分离出来时,对后者进行完整的分子和定量研究构成了脂质组学。像蛋白质组学一样,脂质组学是一个既受技术驱动又推动技术发展的学科,主要技术是质谱法,有或没有在线色谱法和计算机辅助数据分析。在本文中,我们将研究不同脂质组学实验方法的基础原理,包括“ shotgun”和“自上而下”的全局方法,以及更有针对性的液相色谱-或气相色谱-质谱方法。将这些方法应用于鉴定先天性代谢缺陷的实例也将被讨论。

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