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密度泛函方法在非共价相互作用中的应用:色散修正(DFT-D)、交换空穴偶极矩(XDM)理论和专用泛函的比较。

Density-functional approaches to noncovalent interactions: a comparison of dispersion corrections (DFT-D), exchange-hole dipole moment (XDM) theory, and specialized functionals.

机构信息

Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332-0400, USA.

出版信息

J Chem Phys. 2011 Feb 28;134(8):084107. doi: 10.1063/1.3545971.

Abstract

A systematic study of techniques for treating noncovalent interactions within the computationally efficient density functional theory (DFT) framework is presented through comparison to benchmark-quality evaluations of binding strength compiled for molecular complexes of diverse size and nature. In particular, the efficacy of functionals deliberately crafted to encompass long-range forces, a posteriori DFT+dispersion corrections (DFT-D2 and DFT-D3), and exchange-hole dipole moment (XDM) theory is assessed against a large collection (469 energy points) of reference interaction energies at the CCSD(T) level of theory extrapolated to the estimated complete basis set limit. The established S22 [revised in J. Chem. Phys. 132, 144104 (2010)] and JSCH test sets of minimum-energy structures, as well as collections of dispersion-bound (NBC10) and hydrogen-bonded (HBC6) dissociation curves and a pairwise decomposition of a protein-ligand reaction site (HSG), comprise the chemical systems for this work. From evaluations of accuracy, consistency, and efficiency for PBE-D, BP86-D, B97-D, PBE0-D, B3LYP-D, B970-D, M05-2X, M06-2X, ωB97X-D, B2PLYP-D, XYG3, and B3LYP-XDM methodologies, it is concluded that distinct, often contrasting, groups of these elicit the best performance within the accessible double-ζ or robust triple-ζ basis set regimes and among hydrogen-bonded or dispersion-dominated complexes. For overall results, M05-2X, B97-D3, and B970-D2 yield superior values in conjunction with aug-cc-pVDZ, for a mean absolute deviation of 0.41 - 0.49 kcal/mol, and B3LYP-D3, B97-D3, ωB97X-D, and B2PLYP-D3 dominate with aug-cc-pVTZ, affording, together with XYG3/6-311+G(3df,2p), a mean absolute deviation of 0.33 - 0.38 kcal/mol.

摘要

本文通过与针对不同大小和性质的分子复合物的基准质量结合强度评估进行比较,系统地研究了在计算效率高的密度泛函理论(DFT)框架内处理非共价相互作用的技术。特别是,评估了专门设计的功能,以包含远程力,后验 DFT+色散校正(DFT-D2 和 DFT-D3)和交换孔偶极矩(XDM)理论,以评估与在 CCSD(T)理论水平上外推到估计的完整基组极限的大量参考相互作用能(469 个能量点)的集合。建立的 S22 [在 J. Chem. Phys. 132, 144104(2010)中修订]和 JSCH 最小能结构测试集,以及色散束缚(NBC10)和氢键(HBC6)离解曲线的集合以及蛋白质-配体反应位点(HSG)的成对分解,构成了这项工作的化学体系。从对 PBE-D、BP86-D、B97-D、PBE0-D、B3LYP-D、B970-D、M05-2X、M06-2X、ωB97X-D、B2PLYP-D、XYG3 和 B3LYP-XDM 方法的准确性、一致性和效率的评估中得出结论,这些方法中的不同的、通常是对比的组,在可访问的双 ζ 或稳健的三 ζ 基组范围内,以及在氢键或分散主导的复合物中,表现出最佳性能。对于总体结果,M05-2X、B97-D3 和 B970-D2 与 aug-cc-pVDZ 一起产生更好的值,平均绝对偏差为 0.41-0.49 kcal/mol,B3LYP-D3、B97-D3、ωB97X-D 和 B2PLYP-D3 与 aug-cc-pVTZ 一起占主导地位,与 XYG3/6-311+G(3df,2p)一起,平均绝对偏差为 0.33-0.38 kcal/mol。

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