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海洋蓝细菌中天然产物生物合成的时间动态。

Temporal dynamics of natural product biosynthesis in marine cyanobacteria.

机构信息

Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, and Department of Biology, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0212, USA.

出版信息

Proc Natl Acad Sci U S A. 2011 Mar 29;108(13):5226-31. doi: 10.1073/pnas.1012813108. Epub 2011 Mar 10.

Abstract

Sessile marine organisms are prolific sources of biologically active natural products. However, these compounds are often found in highly variable amounts, with the abiotic and biotic factors governing their production remaining poorly understood. We present an approach that permits monitoring of in vivo natural product production and turnover using mass spectrometry and stable isotope ((15)N) feeding with small cultures of various marine strains of the natural product-rich cyanobacterial genus Lyngbya. This temporal comparison of the amount of in vivo (15)N labeling of nitrogen-containing metabolites represents a direct way to discover and evaluate factors influencing natural product biosynthesis, as well as the timing of specific steps in metabolite assembly, and is a strong complement to more traditional in vitro studies. Relative quantification of (15)N labeling allowed the concurrent measurement of turnover rates of multiple natural products from small amounts of biomass. This technique also afforded the production of the neurotoxic jamaicamides to be more carefully studied, including an assessment of how jamaicamide turnover compares with filament growth rate and primary metabolism and provided new insights into the biosynthetic timing of jamaicamide A bromination. This approach should be valuable in determining how environmental factors affect secondary metabolite production, ultimately yielding insight into the energetic balance among growth, primary production, and secondary metabolism, and thus aid in the development of methods to improve compound yields for biomedical or biotechnological applications.

摘要

固着海洋生物是生物活性天然产物的丰富来源。然而,这些化合物的含量通常变化很大,其产生的非生物和生物因素仍知之甚少。我们提出了一种使用质谱法和稳定同位素((15)N)喂养小型培养物来监测各种富含天然产物的蓝藻属海洋菌株体内天然产物生产和周转的方法。这种对含氮代谢物体内(15)N 标记量的时间比较是一种直接发现和评估影响天然产物生物合成的因素以及代谢物组装特定步骤时间的方法,是对更传统的体外研究的有力补充。(15)N 标记的相对定量允许从小量生物量中同时测量多种天然产物的周转率。该技术还可以更仔细地研究神经毒性 Jamaicamides 的产生,包括评估 Jamaicamide 周转与丝状体生长速度和初级代谢的比较,并深入了解 Jamaicamide A 溴化的生物合成时间。该方法在确定环境因素如何影响次生代谢产物的产生方面应该很有价值,最终有助于了解生长、初级生产和次生代谢之间的能量平衡,从而有助于开发用于生物医学或生物技术应用的提高化合物产量的方法。

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