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海洋细菌 Idiomarina maris sp. nov. ,分离自沉积物。

Idiomarina maris sp. nov., a marine bacterium isolated from sediment.

机构信息

State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Jinan 250100, PR China.

College of Chemical and Environmental Engineering, Shandong University of Science and Technology, Qingdao 266510, PR China.

出版信息

Int J Syst Evol Microbiol. 2012 Feb;62(Pt 2):370-375. doi: 10.1099/ijs.0.027896-0. Epub 2011 Mar 25.

Abstract

A protease-producing marine bacterium, designated CF12-14(T), was isolated from sediment of the South China Sea. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain CF12-14(T) formed a separate lineage within the genus Idiomarina (Gammaproteobacteria). The isolate showed the highest 16S rRNA gene sequence similarity with Idiomarina salinarum ISL-52(T) (94.7 %), Idiomarina seosinensis CL-SP19(T) (94.6 %) and other members of the genus Idiomarina (91.9-94.6 %). Cells were gram-negative, aerobic, flagellated, straight or slightly curved, and often formed buds and prosthecae. Strain CF12-14(T) grew at 4-42 °C (optimum 30-35 °C) and with 0.1-15 % (w/v) NaCl (optimum 2-3 %). The isolate reduced nitrate to nitrite and hydrolysed DNA, but did not produce acids from sugars. The predominant cellular fatty acids were iso-C(15 : 0) (27.4 %), iso-C(17 : 0) (16.0 %) and iso-C(17 : 1)ω9c (15.8 %). The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The major respiratory quinone was ubiquinone 8. The DNA G+C content was 50.4 mol%. The phylogenetic, phenotypic and chemotaxonomic data supported the conclusion that CF12-14(T) represents a novel species of the genus Idiomarina, for which the name Idiomarina maris sp. nov. is proposed. The type strain is CF12-14(T) ( = CCTCC AB 208166(T) = KACC 13974(T)).

摘要

一株产蛋白酶的海洋细菌,命名为 CF12-14(T),从南海沉积物中分离得到。16S rRNA 基因序列的系统发育分析显示,菌株 CF12-14(T)在 Idiomarina 属(变形菌纲)内形成一个单独的谱系。该分离株与 Idiomarina salinarum ISL-52(T)(94.7%)、 Idiomarina seosinensis CL-SP19(T)(94.6%)和其他 Idiomarina 属成员(91.9-94.6%)的 16S rRNA 基因序列相似度最高。细胞呈革兰氏阴性,需氧,有鞭毛,直或略弯,常形成芽和菌褶。菌株 CF12-14(T)在 4-42°C(最适 30-35°C)和 0.1-15%(w/v)NaCl(最适 2-3%)下生长。该分离株还原硝酸盐为亚硝酸盐并水解 DNA,但不能从糖中产生酸。主要的细胞脂肪酸为 iso-C(15:0)(27.4%)、iso-C(17:0)(16.0%)和 iso-C(17:1)ω9c(15.8%)。主要的极性脂为磷脂酰乙醇胺、双磷脂酰甘油和磷脂酰甘油。主要的呼吸醌为泛醌 8。DNA G+C 含量为 50.4 mol%。系统发育、表型和化学分类学数据支持 CF12-14(T) 代表 Idiomarina 属的一个新种的结论,建议将其命名为 Idiomarina maris sp. nov.。模式菌株为 CF12-14(T)( = CCTCC AB 208166(T) = KACC 13974(T))。

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