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预测皮肤和黏膜人乳头瘤病毒中的保守 microRNA。

Prediction of conserved microRNAs from skin and mucosal human papillomaviruses.

机构信息

Diamantina Institute for Cancer, Immunology and Metabolic Medicine, Princess Alexandra Hospital, The University of Queensland, Woolloongabba, Brisbane, Australia.

出版信息

Arch Virol. 2011 Jul;156(7):1161-71. doi: 10.1007/s00705-011-0974-3. Epub 2011 Mar 26.

DOI:10.1007/s00705-011-0974-3
PMID:21442230
Abstract

Eight human papillomavirus (HPV) types including four cutaneous HPV types (HPV-5, HPV-8, HPV-20 and HPV-38) and four mucosal HPV types (HPV-6, HPV-11, HPV-16 and HPV-18) were selected for this miRNA study. Pre-miRNAs were predicted using a computer programme, and the conserved mature miRNAs were compared to currently known miRNAs. Predicted HPV miRNAs related to miR-466, -467 and -669 were common and specific to the mucosal HPV types. Northern blot hybridization confirmed a predicted miRNA in HPV-positive cervical cancer cell lines encoded by mucosal HPVs. HPV-38 was predicted to express an miRNA conserved to human let-7a and the expression of let-7a, in HPV-38-positive non-melanoma skin cancer (NMSC) biopsies was 10-fold higher than those with HPV-positive (for other types except HPV-38) and HPV-negative NMSCs, suggesting that let-7a expression might be related to HPV-38 infection. Potential gene targets of the predicted miRNA that may aid HPV in infection and pathogenesis were also analysed.

摘要

选择了八种人乳头瘤病毒 (HPV) 类型,包括四种皮肤 HPV 类型(HPV-5、HPV-8、HPV-20 和 HPV-38)和四种黏膜 HPV 类型(HPV-6、HPV-11、HPV-16 和 HPV-18)进行这项 miRNA 研究。使用计算机程序预测前体 miRNA,并将保守的成熟 miRNA 与当前已知的 miRNA 进行比较。预测与 miR-466、-467 和 -669 相关的 HPV miRNAs 是黏膜 HPV 类型所共有的和特异的。Northern blot 杂交证实了黏膜 HPV 编码的 HPV 阳性宫颈癌细胞系中的一种预测 miRNA。HPV-38 预测表达一种与人类 let-7a 保守的 miRNA,HPV-38 阳性非黑色素瘤皮肤癌 (NMSC) 活检中 let-7a 的表达比 HPV 阳性(除 HPV-38 以外的其他类型)和 HPV 阴性 NMSC 高 10 倍,提示 let-7a 表达可能与 HPV-38 感染有关。还分析了预测 miRNA 的潜在基因靶标,这些靶标可能有助于 HPV 感染和发病机制。

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