Quality metrics to accompany spike sorting of extracellular signals.
作者信息
Hill Daniel N, Mehta Samar B, Kleinfeld David
机构信息
Institute of Neuroscience, Technical University Munich, 80802 Munich, Germany.
出版信息
J Neurosci. 2011 Jun 15;31(24):8699-705. doi: 10.1523/JNEUROSCI.0971-11.2011.
Abstract
摘要
相似文献
1
Quality metrics to accompany spike sorting of extracellular signals.用于伴随细胞外信号峰值分选的质量指标。
J Neurosci. 2011 Jun 15;31(24):8699-705. doi: 10.1523/JNEUROSCI.0971-11.2011.
2
A Framework for the Comparative Assessment of Neuronal Spike Sorting Algorithms towards More Accurate Off-Line and On-Line Microelectrode Arrays Data Analysis.面向更精确离线和在线微电极阵列数据分析的神经元尖峰排序算法的比较评估框架。
Comput Intell Neurosci. 2016;2016:8416237. doi: 10.1155/2016/8416237. Epub 2016 Apr 27.
3
Automated spike sorting algorithm based on Laplacian eigenmaps and k-means clustering.基于拉普拉斯特征映射和 K-均值聚类的自动尖峰分类算法。
J Neural Eng. 2011 Feb;8(1):016006. doi: 10.1088/1741-2560/8/1/016006. Epub 2011 Jan 19.
4
Automatic spike sorting using tuning information.利用调谐信息进行自动尖峰分类
Neural Comput. 2009 Sep;21(9):2466-501. doi: 10.1162/neco.2009.12-07-669.
5
Spike train metrics.脉冲序列指标
Curr Opin Neurobiol. 2005 Oct;15(5):585-92. doi: 10.1016/j.conb.2005.08.002.
6
MEArec: A Fast and Customizable Testbench Simulator for Ground-truth Extracellular Spiking Activity.MEArec：一种用于真实胞外尖峰活动的快速可定制测试台仿真器。
Neuroinformatics. 2021 Jan;19(1):185-204. doi: 10.1007/s12021-020-09467-7.
7
SHYBRID: A Graphical Tool for Generating Hybrid Ground-Truth Spiking Data for Evaluating Spike Sorting Performance.SHYBRID：用于生成混合地面真实 Spike 数据以评估 Spike 排序性能的图形工具。
Neuroinformatics. 2021 Jan;19(1):141-158. doi: 10.1007/s12021-020-09474-8.
8
Graph-Laplacian features for neural waveform classification.图-拉普拉斯特征在神经波形分类中的应用。
IEEE Trans Biomed Eng. 2011 May;58(5):1365-72. doi: 10.1109/TBME.2010.2090349. Epub 2010 Nov 1.
9
Applicability of independent component analysis on high-density microelectrode array recordings.独立成分分析在高密度微电极阵列记录中的适用性。
J Neurophysiol. 2012 Jul;108(1):334-48. doi: 10.1152/jn.01106.2011. Epub 2012 Apr 4.
10
In quest of the missing neuron: spike sorting based on dominant-sets clustering.寻找缺失的神经元：基于支配集聚类的尖峰分类。
Comput Methods Programs Biomed. 2012 Jul;107(1):28-35. doi: 10.1016/j.cmpb.2011.10.015. Epub 2011 Dec 2.
引用本文的文献
1
Brain stimulation preferentially influences long-range projections.脑部刺激优先影响远程投射。
Sci Adv. 2025 Sep 5;11(36):eadx2106. doi: 10.1126/sciadv.adx2106.
2
Unsupervised pipeline for the identification of cortical excitatory and inhibitory neurons in high-density multielectrode arrays with ground-truth validation.用于在具有真实验证的高密度多电极阵列中识别皮层兴奋性和抑制性神经元的无监督管道。
Elife. 2025 Aug 28;14:RP106557. doi: 10.7554/eLife.106557.
3
Distinct Synaptic Mechanisms Drive Variant-Mediated Pathogenesis in iPSC-Derived Neuronal Models of Autism and Schizophrenia.不同的突触机制在自闭症和精神分裂症的诱导多能干细胞衍生神经元模型中驱动变异介导的发病机制。
bioRxiv. 2025 Jul 19:2025.07.18.664735. doi: 10.1101/2025.07.18.664735.
4
KIASORT: Knowledge-Integrated Automated Spike Sorting for Geometry-Free Neuron Tracking.KIASORT：用于无几何形状神经元追踪的知识集成自动尖峰分类
bioRxiv. 2025 Jul 16:2025.07.10.664175. doi: 10.1101/2025.07.10.664175.
5
Stimulation modulates cell assemblies linked with gene networks in the human temporal cortex .刺激可调节人类颞叶皮质中与基因网络相关的细胞集合。
bioRxiv. 2025 Jun 25:2025.06.25.661589. doi: 10.1101/2025.06.25.661589.
6
Self-Organizing Neural Networks in Organoids Reveal Principles of Forebrain Circuit Assembly.类器官中的自组织神经网络揭示了前脑回路组装的原理。
bioRxiv. 2025 May 2:2025.05.01.651773. doi: 10.1101/2025.05.01.651773.
7
Bypassing spike sorting: Density-based decoding using spike localization from dense multielectrode probes.绕过尖峰分类：基于密度的解码，利用来自密集多电极探针的尖峰定位
Adv Neural Inf Process Syst. 2023;36:77604-77631.
8
Intraretinal Electrophysiology and Resistivity Profiles of WT and RCS Rat Retina.野生型和RCS大鼠视网膜的视网膜内电生理学及电阻率剖面图
Sensors (Basel). 2025 Jun 16;25(12):3765. doi: 10.3390/s25123765.
9
Structured experience shapes strategy learning and neural dynamics in the medial entorhinal cortex.结构化体验塑造内嗅皮层中的策略学习和神经动力学。
Res Sq. 2025 May 28:rs.3.rs-6658028. doi: 10.21203/rs.3.rs-6658028/v1.
10
A multidimensional distributional map of future reward in dopamine neurons.多巴胺神经元中未来奖励的多维分布图。
Nature. 2025 Jun;642(8068):691-699. doi: 10.1038/s41586-025-09089-6. Epub 2025 Jun 4.
本文引用的文献
1
Kalman filter mixture model for spike sorting of non-stationary data.用于非平稳数据的 Spike 排序的卡尔曼滤波混合模型。
J Neurosci Methods. 2011 Mar 15;196(1):159-69. doi: 10.1016/j.jneumeth.2010.12.002. Epub 2010 Dec 21.
2
Phase-to-rate transformations encode touch in cortical neurons of a scanning sensorimotor system.相位到频率的转换对扫描感觉运动系统的皮质神经元中的触觉进行编码。
Nat Neurosci. 2009 Apr;12(4):492-501. doi: 10.1038/nn.2283. Epub 2009 Mar 8.
3
The Lantern: an ultra-light micro-drive for multi-tetrode recordings in mice and other small animals.灯笼：一种用于小鼠和其他小动物多电极记录的超轻型微驱动器。
J Neurosci Methods. 2009 Apr 15;178(2):291-300. doi: 10.1016/j.jneumeth.2008.12.024. Epub 2008 Dec 30.
4
Large-scale chronically implantable precision motorized microdrive array for freely behaving animals.用于自由活动动物的大规模慢性可植入精密电动微驱动阵列。
J Neurophysiol. 2008 Oct;100(4):2430-40. doi: 10.1152/jn.90687.2008. Epub 2008 Jul 30.
5
Techniques for extracting single-trial activity patterns from large-scale neural recordings.从大规模神经记录中提取单次试验活动模式的技术。
Curr Opin Neurobiol. 2007 Oct;17(5):609-18. doi: 10.1016/j.conb.2007.11.001.
6
In vivo measurement of cortical impedance spectrum in monkeys: implications for signal propagation.猴子大脑皮质阻抗谱的活体测量：对信号传播的影响
Neuron. 2007 Sep 6;55(5):809-23. doi: 10.1016/j.neuron.2007.07.027.
7
Quantifying the isolation quality of extracellularly recorded action potentials.量化细胞外记录动作电位的隔离质量。
J Neurosci Methods. 2007 Jul 30;163(2):267-82. doi: 10.1016/j.jneumeth.2007.03.012. Epub 2007 Mar 24.
8
Automated optimal detection and classification of neural action potentials in extra-cellular recordings.细胞外记录中神经动作电位的自动最优检测与分类
J Neurosci Methods. 2007 May 15;162(1-2):364-76. doi: 10.1016/j.jneumeth.2007.01.023. Epub 2007 Feb 4.
9
Efficient spike-sorting of multi-state neurons using inter-spike intervals information.利用峰峰间期信息对多状态神经元进行高效的尖峰分类
J Neurosci Methods. 2006 Jan 15;150(1):16-29. doi: 10.1016/j.jneumeth.2005.05.023. Epub 2005 Aug 8.
10
Signal acquisition and analysis for cortical control of neuroprosthetics.用于神经假体皮层控制的信号采集与分析。
Curr Opin Neurobiol. 2004 Dec;14(6):758-62. doi: 10.1016/j.conb.2004.10.013.
Zotero 插件