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关于铝诱导含锰超氧化物歧化酶失活及构象变化:结合对接模拟的综合研究

Towards Al-induced manganese-containing superoxide dismutase inactivation and conformational changes: an integrating study with docking simulations.

作者信息

Yang Jiang-Liu, Yin Shang-Jun, Si Yue-Xiu, Lü Zhi-Rong, Shao Xiangrong, Park Daeui, Chung Hae Young, Zhou Hai-Meng, Qian Guo-Ying, Zhang Zi-Ping

机构信息

School of Life Science, Ningxia University, Yinchuan 750021, China.

出版信息

Enzyme Res. 2011;2011:307464. doi: 10.4061/2011/307464. Epub 2011 May 29.

DOI:10.4061/2011/307464
PMID:21687640
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3112498/
Abstract

Superoxide dismutase (SOD, EC 1.15.1.1) plays an important antioxidant defense role in skins exposed to oxygen. We studied the inhibitory effects of Al(3+) on the activity and conformation of manganese-containing SOD (Mn-SOD). Mn-SOD was significantly inactivated by Al(3+) in a dose-dependent manner. The kinetic studies showed that Al(3+) inactivated Mn-SOD follows the first-order reaction. Al(3+) increased the degree of secondary structure of Mn-SOD and also disrupted the tertiary structure of Mn-SOD, which directly resulted in enzyme inactivation. We further simulated the docking between Mn-SOD and Al(3+) (binding energy for Dock 6.3: -14.07 kcal/mol) and suggested that ASP152 and GLU157 residues were predicted to interact with Al(3+), which are not located in the Mn-contained active site. Our results provide insight into the inactivation of Mn-SOD during unfolding in the presence of Al(3+) and allow us to describe a ligand binding via inhibition kinetics combined with the computational prediction.

摘要

超氧化物歧化酶(SOD,EC 1.15.1.1)在暴露于氧气的皮肤中发挥重要的抗氧化防御作用。我们研究了Al(3+)对含锰超氧化物歧化酶(Mn-SOD)活性和构象的抑制作用。Al(3+)以剂量依赖性方式使Mn-SOD显著失活。动力学研究表明,Al(3+)使Mn-SOD失活遵循一级反应。Al(3+)增加了Mn-SOD的二级结构程度,同时破坏了Mn-SOD的三级结构,这直接导致酶失活。我们进一步模拟了Mn-SOD与Al(3+)之间的对接(Dock 6.3的结合能:-14.07 kcal/mol),并表明预测ASP152和GLU157残基与Al(3+)相互作用,它们并不位于含锰活性位点。我们的结果为在Al(3+)存在下Mn-SOD解折叠过程中的失活提供了见解,并使我们能够通过抑制动力学结合计算预测来描述配体结合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/e2f6cb8ab621/ER2011-307464.009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/c6881fc4041f/ER2011-307464.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/54f951f3d4e2/ER2011-307464.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/13c2018e4c3c/ER2011-307464.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/6f9c2456d9eb/ER2011-307464.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/a8d51482230a/ER2011-307464.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/4ca36ab378f5/ER2011-307464.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/32c8a738d2e1/ER2011-307464.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/8d49d89ef422/ER2011-307464.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/e2f6cb8ab621/ER2011-307464.009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/c6881fc4041f/ER2011-307464.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/54f951f3d4e2/ER2011-307464.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/13c2018e4c3c/ER2011-307464.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/6f9c2456d9eb/ER2011-307464.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/a8d51482230a/ER2011-307464.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/4ca36ab378f5/ER2011-307464.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/32c8a738d2e1/ER2011-307464.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/8d49d89ef422/ER2011-307464.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0af2/3112498/e2f6cb8ab621/ER2011-307464.009.jpg

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本文引用的文献

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