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嗜酸可脱硫单胞菌 BC 株和 K601T 株的基因组序列。

Genome sequences of Alicycliphilus denitrificans strains BC and K601T.

机构信息

Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB, Wageningen, The Netherlands.

出版信息

J Bacteriol. 2011 Sep;193(18):5028-9. doi: 10.1128/JB.00365-11. Epub 2011 Jul 8.

Abstract

Alicycliphilus denitrificans strain BC and A. denitrificans strain K601(T) degrade cyclic hydrocarbons. These strains have been isolated from a mixture of wastewater treatment plant material and benzene-polluted soil and from a wastewater treatment plant, respectively, suggesting their role in bioremediation of soil and water. Although the strains are phylogenetically closely related, there are some clear physiological differences. The hydrocarbon cyclohexanol, for example, can be degraded by strain K601(T) but not by strain BC. Furthermore, both strains can use nitrate and oxygen as an electron acceptor, but only strain BC can use chlorate as electron acceptor. To better understand the nitrate and chlorate reduction mechanisms coupled to the oxidation of cyclic compounds, the genomes of A. denitrificans strains BC and K601(T) were sequenced. Here, we report the complete genome sequences of A. denitrificans strains BC and K601(T).

摘要

酸硫环菌 BC 株和酸硫环菌 K601(T) 株能够降解环状烃类物质。这两株菌均分离自污水处理厂材料和苯污染土壤的混合物以及一个污水处理厂,这表明它们在土壤和水的生物修复中具有作用。尽管这两株菌在系统发育上密切相关,但在生理特性上有明显差异。例如,菌株 K601(T) 可以降解环己醇,而 BC 株则不能。此外,这两株菌都可以利用硝酸盐和氧气作为电子受体,但只有 BC 株可以利用氯酸盐作为电子受体。为了更好地理解与环状化合物氧化相偶联的硝酸盐和氯酸盐还原机制,我们对酸硫环菌 BC 株和 K601(T)株的基因组进行了测序。在这里,我们报道了酸硫环菌 BC 株和 K601(T)株的全基因组序列。

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本文引用的文献

1
Purification, characterization, and cloning of a bifunctional molybdoenzyme with hydratase and alcohol dehydrogenase activity.
Appl Microbiol Biotechnol. 2011 Mar;89(6):1831-40. doi: 10.1007/s00253-010-2996-2. Epub 2010 Dec 1.
2
Prodigal: prokaryotic gene recognition and translation initiation site identification.
BMC Bioinformatics. 2010 Mar 8;11:119. doi: 10.1186/1471-2105-11-119.
3
Isolation and characterization of Alicycliphilus denitrificans strain BC, which grows on benzene with chlorate as the electron acceptor.
Appl Environ Microbiol. 2008 Nov;74(21):6672-81. doi: 10.1128/AEM.00835-08. Epub 2008 Sep 12.
4
Genome sequencing in microfabricated high-density picolitre reactors.
Nature. 2005 Sep 15;437(7057):376-80. doi: 10.1038/nature03959. Epub 2005 Jul 31.
6
Solexa Ltd.
Pharmacogenomics. 2004 Jun;5(4):433-8. doi: 10.1517/14622416.5.4.433.
7
Alicycliphilus denitrificans gen. nov., sp. nov., a cyclohexanol-degrading, nitrate-reducing beta-proteobacterium.
Int J Syst Evol Microbiol. 2003 Jan;53(Pt 1):147-152. doi: 10.1099/ijs.0.02276-0.
8
Purification and characterization of chlorite dismutase: a novel oxygen-generating enzyme.
Arch Microbiol. 1996 Nov;166(5):321-6. doi: 10.1007/s002030050390.

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