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本文引用的文献

1
Untargeted metabolomics identifies enterobiome metabolites and putative uremic toxins as substrates of organic anion transporter 1 (Oat1).非靶向代谢组学鉴定肠菌代谢物和潜在尿毒症毒素为有机阴离子转运蛋白 1(Oat1)的底物。
J Proteome Res. 2011 Jun 3;10(6):2842-51. doi: 10.1021/pr200093w. Epub 2011 Apr 22.
2
Remote communication through solute carriers and ATP binding cassette drug transporter pathways: an update on the remote sensing and signaling hypothesis.通过溶质载体和 ATP 结合盒式药物转运体途径的远程通讯:远程感应和信号假说的最新进展。
Mol Pharmacol. 2011 May;79(5):795-805. doi: 10.1124/mol.110.070607. Epub 2011 Feb 11.
3
Analysis of three-dimensional systems for developing and mature kidneys clarifies the role of OAT1 and OAT3 in antiviral handling.分析发育和成熟肾脏的三维系统,阐明了 OAT1 和 OAT3 在抗病毒处理中的作用。
J Biol Chem. 2011 Jan 7;286(1):243-51. doi: 10.1074/jbc.M110.139949. Epub 2010 Oct 4.
4
Applications of genome-scale metabolic reconstructions.基因组尺度代谢重建的应用。
Mol Syst Biol. 2009;5:320. doi: 10.1038/msb.2009.77. Epub 2009 Nov 3.
5
Interaction of organic cations with organic anion transporters.有机阳离子与有机阴离子转运体的相互作用。
J Biol Chem. 2009 Nov 6;284(45):31422-30. doi: 10.1074/jbc.M109.024489. Epub 2009 Sep 8.
6
Genome-scale gene/reaction essentiality and synthetic lethality analysis.全基因组规模的基因/反应必需性及合成致死性分析。
Mol Syst Biol. 2009;5:301. doi: 10.1038/msb.2009.56. Epub 2009 Aug 18.
7
Toward a systems level understanding of organic anion and other multispecific drug transporters: a remote sensing and signaling hypothesis.迈向对有机阴离子及其他多特异性药物转运体的系统层面理解:一种遥感与信号传导假说。
Mol Pharmacol. 2009 Sep;76(3):481-90. doi: 10.1124/mol.109.056564. Epub 2009 Jun 10.
8
GrowMatch: an automated method for reconciling in silico/in vivo growth predictions.GrowMatch:一种用于协调计算机模拟/体内生长预测的自动化方法。
PLoS Comput Biol. 2009 Mar;5(3):e1000308. doi: 10.1371/journal.pcbi.1000308. Epub 2009 Mar 13.
9
Update on the molecular physiology of organic anion transporters.有机阴离子转运体的分子生理学进展
Curr Opin Nephrol Hypertens. 2008 Sep;17(5):499-505. doi: 10.1097/MNH.0b013e32830b5d5d.
10
Physiology, structure, and regulation of the cloned organic anion transporters.克隆的有机阴离子转运体的生理学、结构与调控
Xenobiotica. 2008 Jul;38(7-8):889-935. doi: 10.1080/00498250801927435.

通过整合的“组学”驱动网络和功能分析将有机阴离子转运蛋白 1 与代谢途径联系起来。

Linkage of organic anion transporter-1 to metabolic pathways through integrated "omics"-driven network and functional analysis.

机构信息

Department of Pediatrics, University of California San Diego, La Jolla, California 92093, USA.

出版信息

J Biol Chem. 2011 Sep 9;286(36):31522-31. doi: 10.1074/jbc.M111.272534. Epub 2011 Jul 12.

DOI:10.1074/jbc.M111.272534
PMID:21757732
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3173137/
Abstract

The main kidney transporter of many commonly prescribed drugs (e.g. penicillins, diuretics, antivirals, methotrexate, and non-steroidal anti-inflammatory drugs) is organic anion transporter-1 (OAT1), originally identified as NKT (Lopez-Nieto, C. E., You, G., Bush, K. T., Barros, E. J., Beier, D. R., and Nigam, S. K. (1997) J. Biol. Chem. 272, 6471-6478). Targeted metabolomics in knockouts have shown that OAT1 mediates the secretion or reabsorption of many important metabolites, including intermediates in carbohydrate, fatty acid, and amino acid metabolism. This observation raises the possibility that OAT1 helps regulate broader metabolic activities. We therefore examined the potential roles of OAT1 in metabolic pathways using Recon 1, a functionally tested genome-scale reconstruction of human metabolism. A computational approach was used to analyze in vivo metabolomic as well as transcriptomic data from wild-type and OAT1 knock-out animals, resulting in the implication of several metabolic pathways, including the citric acid cycle, polyamine, and fatty acid metabolism. Validation by in vitro and ex vivo analysis using Xenopus oocyte, cell culture, and kidney tissue assays demonstrated interactions between OAT1 and key intermediates in these metabolic pathways, including previously unknown substrates, such as polyamines (e.g. spermine and spermidine). A genome-scale metabolic network reconstruction generated some experimentally supported predictions for metabolic pathways linked to OAT1-related transport. The data support the possibility that the SLC22 and other families of transporters, known to be expressed in many tissues and primarily known for drug and toxin clearance, are integral to a number of endogenous pathways and may be involved in a larger remote sensing and signaling system (Ahn, S. Y., and Nigam, S. K. (2009) Mol. Pharmacol. 76, 481-490, and Wu, W., Dnyanmote, A. V., and Nigam, S. K. (2011) Mol. Pharmacol. 79, 795-805). Drugs may alter metabolism by competing for OAT1 binding of metabolites.

摘要

许多常用处方药(如青霉素、利尿剂、抗病毒药、甲氨蝶呤和非甾体抗炎药)的主要肾脏转运蛋白是有机阴离子转运蛋白-1(OAT1),最初被鉴定为 NKT(Lopez-Nieto,C. E.,You,G.,Bush,K. T.,Barros,E. J.,Beier,D. R.,和 Nigam,S. K.(1997)J. Biol. Chem. 272,6471-6478)。敲除动物的靶向代谢组学研究表明,OAT1 介导许多重要代谢物的分泌或重吸收,包括碳水化合物、脂肪酸和氨基酸代谢的中间产物。这一观察结果提出了 OAT1 有助于调节更广泛代谢活动的可能性。因此,我们使用经过功能测试的人类代谢全基因组重建 Recon 1 来研究 OAT1 在代谢途径中的潜在作用。一种计算方法用于分析野生型和 OAT1 敲除动物的体内代谢组学和转录组学数据,结果表明几种代谢途径的作用,包括柠檬酸循环、多胺和脂肪酸代谢。使用 Xenopus oocyte、细胞培养和肾脏组织测定的体外和离体分析验证表明,OAT1 与这些代谢途径中的关键中间产物相互作用,包括以前未知的底物,如多胺(如精胺和亚精胺)。全基因组代谢网络重建生成了一些与 OAT1 相关转运相关的代谢途径的实验支持预测。数据支持这样一种可能性,即 SLC22 和其他家族的转运蛋白,已知在许多组织中表达,主要用于清除药物和毒素,是许多内源性途径的组成部分,可能参与更大的远程传感和信号系统(Ahn,S. Y.,和 Nigam,S. K.(2009)Mol. Pharmacol. 76,481-490,和 Wu,W.,Dnyanmote,A. V.,和 Nigam,S. K.(2011)Mol. Pharmacol. 79,795-805)。药物可能通过与 OAT1 结合代谢物竞争来改变代谢。