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实时荧光定量PCR检测肠道病毒核酸标准品的设计与应用

Design and Application of Nucleic Acid Standards for Quantitative Detection of Enteric Viruses by Real-Time PCR.

作者信息

Martínez-Martínez Mónica, Diez-Valcarce Marta, Hernández Marta, Rodríguez-Lázaro David

出版信息

Food Environ Virol. 2011 Jun;3(2):92-98. doi: 10.1007/s12560-011-9062-9. Epub 2011 May 21.

Abstract

Synthetic multiple-target RNA and DNA oligonucleotides were constructed for use as quantification standards for nucleic acid amplification assays for human norovirus genogroup I and II, hepatitis E virus, murine norovirus, human adenovirus, porcine adenovirus and bovine polyomavirus. This approach overcomes the problems related to the difficulty of obtaining practical quantities of viral RNA and DNA from these viruses. The quantification capacity of assays using the standards was excellent in each case (R(2) > 0.998 and PCR efficiency > 0.89). The copy numbers of the standards were equivalent to the genome equivalents of representative viruses (murine norovirus and human adenovirus), ensuring an accurate determination of virus presence. The availability of these standards should facilitate the implementation of nucleic acid amplification-based methods for quantitative virus detection.

摘要

构建了合成多靶点RNA和DNA寡核苷酸,用作人类诺如病毒I和II基因组、戊型肝炎病毒、鼠诺如病毒、人腺病毒、猪腺病毒和牛多瘤病毒核酸扩增检测的定量标准。这种方法克服了从这些病毒中获取实际数量的病毒RNA和DNA存在困难的相关问题。使用这些标准进行检测的定量能力在每种情况下都非常出色(R(2) > 0.998且PCR效率> 0.89)。标准的拷贝数与代表性病毒(鼠诺如病毒和人腺病毒)的基因组当量相当,确保准确测定病毒的存在。这些标准的可用性应有助于实施基于核酸扩增的定量病毒检测方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/adf8/3107435/eb4b9ea2a104/12560_2011_9062_Fig1_HTML.jpg

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