Department of Computer Science, University of California, Santa Barbara, CA 93106-5110, USA.
J Biol Rhythms. 2011 Aug;26(4):353-62. doi: 10.1177/0748730411409863.
Cells in the suprachiasmatic nucleus (SCN) display remarkable precision, while either physically or chemically decoupling these cells from each other leads to a dramatic increase in period-to-period variability. Where previous studies have classified cells as either arrhythmic or circadian, our wavelet analysis reveals that individual cells, when removed from network interactions, intermittently express circadian and/or longer infradian periods. We reproduce the characteristic period distribution of uncoupled SCN cells with a stochastic model of the uncoupled SCN cell near a bifurcation in Bmal1 transcription repression. This suggests that the uncoupled cells may be switching between 2 oscillatory mechanisms: the indirect negative feedback of protein complex PER-CRY on the expression of Per and Cry genes, and the negative feedback of CLOCK-BMAL1 on the expression of the Bmal1 gene. The model is particularly sensitive near this bifurcation point, with only a small change in Bmal1 transcription repression needed to switch from the stable precision of coupled SCN cells to the unstable oscillations of decoupled individual cells, making this rate constant, an ideal target for cell signaling in the SCN.
视交叉上核(SCN)中的细胞显示出显著的精度,而将这些细胞在物理上或化学上彼此分离会导致周期之间的可变性显著增加。之前的研究将细胞分为非节律性或节律性,而我们的小波分析表明,当单个细胞从网络相互作用中分离出来时,它们会间歇性地表达节律性和/或更长的亚节律性周期。我们使用 Bmal1 转录抑制处分岔附近的未耦合 SCN 细胞的随机模型,再现了未耦合 SCN 细胞的特征周期分布。这表明未耦合的细胞可能在两种振荡机制之间切换:蛋白质复合物 PER-CRY 对 Per 和 Cry 基因表达的间接负反馈,以及 CLOCK-BMAL1 对 Bmal1 基因表达的负反馈。该模型在该分岔点附近特别敏感,只需稍微改变 Bmal1 转录抑制,就可以从耦合 SCN 细胞的稳定精度切换到去耦合单个细胞的不稳定振荡,从而使这个速率常数成为 SCN 中细胞信号的理想目标。