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脂质体结合诱导的单链 RNA 构象变化。

Conformational change of single-stranded RNAs induced by liposome binding.

机构信息

Division of Chemical Engineering, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan.

出版信息

Nucleic Acids Res. 2011 Nov 1;39(20):8891-900. doi: 10.1093/nar/gkr568. Epub 2011 Jul 23.

DOI:10.1093/nar/gkr568
PMID:21785134
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3203612/
Abstract

The interaction between single-stranded RNAs and liposomes was studied using UV, Fourier Transform Infrared spectroscopy (FTIR) and Circular Dichroism spectroscopy (CD). The effect of the surface characteristics of liposomes, which were composed of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and modified with cholesterol (Ch) or 1,2-dioleoyl-3-trimethylammonium propane (DOTAP), on the liposome-RNA interaction was investigated. The fluorescence of 6-(p-toluidino)naphthalene-2-sulfonate (TNS) embedded in the liposome surface (ε = 30-40) was decreased in the presence of tRNA, suggesting that single-stranded tRNA could bind onto the liposome. The dehydration of -PO₂⁻-, guanine (G) and cytosine (C) of tRNA molecules in the presence of liposomes suggested both an electrostatic interaction (phosphate backbone of tRNA and trimethylammonium group of POPC, DOTAP) and a hydrophobic interaction (guanine or cytosine of tRNA and aliphatic tail of lipid). The tRNA conformation on the liposome was determined by CD spectroscopy. POPC/Ch (70/30) maintained tRNA conformation without any denaturation, while POPC/DOTAP(70/30) drastically denatured it. The mRNA translation was evaluated in an Escherichia coli cell-free translation system. POPC/Ch(70/30) enhanced expression of green fluorescent protein (GFP) (116%) while POPC/DOTAP(70/30) inhibited (37%), suggesting that the conformation of RNAs was closely related to the translation efficiency. Therefore, single-stranded RNAs could bind to liposomal membranes through electrostatic and hydrophobic attraction, after which conformational changes were induced depending on the liposome characteristics.

摘要

使用紫外光谱、傅里叶变换红外光谱(FTIR)和圆二色光谱(CD)研究了单链 RNA 与脂质体的相互作用。研究了由 1-棕榈酰基-2-油酰基-sn-甘油-3-磷酸胆碱(POPC)组成的脂质体的表面特性对脂质体-RNA 相互作用的影响,这些脂质体经过胆固醇(Ch)或 1,2-二油酰基-3-三甲铵丙烷(DOTAP)修饰。嵌入脂质体表面的 6-(对甲苯亚氨基)-2-萘磺酸盐(TNS)的荧光(ε = 30-40)在 tRNA 存在下降低,表明单链 tRNA 可以结合到脂质体上。在脂质体存在下 tRNA 分子的 -PO₂⁻、鸟嘌呤(G)和胞嘧啶(C)的去水作用表明存在静电相互作用(tRNA 的磷酸骨架和 POPC、DOTAP 的三甲铵基团)和疏水相互作用(tRNA 的鸟嘌呤或胞嘧啶和脂质的脂肪链)。CD 光谱法确定了 tRNA 在脂质体上的构象。POPC/Ch(70/30)保持 tRNA 构象而无任何变性,而 POPC/DOTAP(70/30)则使其严重变性。在大肠杆菌无细胞翻译系统中评估了 mRNA 翻译。POPC/Ch(70/30)增强了绿色荧光蛋白(GFP)的表达(116%),而 POPC/DOTAP(70/30)则抑制了表达(37%),表明 RNA 的构象与翻译效率密切相关。因此,单链 RNA 可以通过静电和疏水吸引结合到脂质体膜上,之后根据脂质体的特性诱导构象变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/06ce0f9bc302/gkr568f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/ef7e5d762ec3/gkr568f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/5d89bdff310c/gkr568f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/c7610f8059c4/gkr568f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/7341d47b1bbb/gkr568f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/e785662c77b3/gkr568f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/06ce0f9bc302/gkr568f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/ef7e5d762ec3/gkr568f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/5d89bdff310c/gkr568f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/c7610f8059c4/gkr568f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/7341d47b1bbb/gkr568f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/e785662c77b3/gkr568f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e774/3203612/06ce0f9bc302/gkr568f6.jpg

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