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从链霉菌 ATCC 55365 中鉴定噻唑肽 GE37468 基因簇,并在变铅青链霉菌中异源表达。

Identification of the thiazolyl peptide GE37468 gene cluster from Streptomyces ATCC 55365 and heterologous expression in Streptomyces lividans.

机构信息

Harvard Medical School, Armenise D1, Room 608, 240 Longwood Avenue, Boston, MA 02115, USA.

出版信息

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13053-8. doi: 10.1073/pnas.1110435108. Epub 2011 Jul 25.

DOI:10.1073/pnas.1110435108
PMID:21788474
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3156177/
Abstract

Thiazolyl peptides are bacterial secondary metabolites that potently inhibit protein synthesis in Gram-positive bacteria and malarial parasites. Recently, our laboratory and others reported that this class of trithiazolyl pyridine-containing natural products is derived from ribosomally synthesized preproteins that undergo a cascade of posttranslational modifications to produce architecturally complex macrocyclic scaffolds. Here, we report the gene cluster responsible for production of the elongation factor Tu (EF-Tu)-targeting 29-member thiazolyl peptide GE37468 from Streptomyces ATCC 55365 and its heterologous expression in the model host Streptomyces lividans. GE37468 harbors an unusual β-methyl-δ-hydroxy-proline residue that may increase conformational rigidity of the macrocycle and impart reduced entropic costs of target binding. Isotope feeding and gene knockout were employed in the engineered S. lividans strain to identify the P450 monooxygenase GetJ as the enzyme involved in posttranslational transformation of isoleucine 8 to β-methyl-δ-hydroxy-proline through a predicted tandem double hydroxylation/cyclization mechanism. Loss of Ile8 oxygenative cyclization or mutation of Ile8 to alanine via preprotein gene replacement resulted in a 4-fold and 2-fold drop in antibiotic activity, respectively. This report of genetic manipulation of a 29-member thiazolyl peptide sets the stage for further genetic examination of structure activity relationships in the EF-Tu targeting class of thiazolyl peptides.

摘要

噻唑肽是细菌的次级代谢产物,能够强烈抑制革兰氏阳性菌和疟原虫的蛋白质合成。最近,我们实验室和其他实验室报告称,这类含有三噻唑基吡啶的天然产物来源于核糖体合成的前体蛋白,这些前体蛋白经历一系列翻译后修饰,产生结构复杂的大环支架。在这里,我们报告了负责产生延长因子 Tu(EF-Tu)靶向的 29 元噻唑肽 GE37468 的基因簇,该肽由链霉菌 ATCC 55365 产生,并在模式宿主链霉菌 lividans 中进行了异源表达。GE37468 含有一个不寻常的β-甲基-δ-羟基-脯氨酸残基,它可能增加大环的构象刚性,并赋予降低的靶标结合熵成本。同位素喂养和基因敲除被用于工程化的链霉菌 lividans 菌株中,以确定 P450 单加氧酶 GetJ 是参与通过预测的串联双羟化/环化机制将异亮氨酸 8 转化为β-甲基-δ-羟基-脯氨酸的翻译后转化的酶。Ile8 氧环化的缺失或通过前体蛋白基因替换将 Ile8 突变为丙氨酸,分别导致抗生素活性下降 4 倍和 2 倍。这项对 29 元噻唑肽的基因操作的报告为进一步研究 EF-Tu 靶向噻唑肽类的结构活性关系奠定了基础。

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