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1
Computational Characterization of Mutations in Cardiac Troponin T Known to Cause Familial Hypertrophic Cardiomyopathy.已知会导致家族性肥厚型心肌病的心肌肌钙蛋白T突变的计算表征。
J Theor Comput Chem. 2007 Sep;6(3):413. doi: 10.1142/S0219633607003271.
2
The C terminus of cardiac troponin I stabilizes the Ca2+-activated state of tropomyosin on actin filaments.心肌肌钙蛋白 I 的 C 端稳定了肌动蛋白丝上肌球蛋白的 Ca2+-激活状态。
Circ Res. 2010 Mar 5;106(4):705-11. doi: 10.1161/CIRCRESAHA.109.210047. Epub 2009 Dec 24.
3
Troponin regulatory function and dynamics revealed by H/D exchange-mass spectrometry.肌钙蛋白调节功能和动力学通过氘/氢交换质谱法揭示。
J Biol Chem. 2010 Jan 22;285(4):2686-94. doi: 10.1074/jbc.M109.062349. Epub 2009 Nov 17.
4
The shape and flexibility of tropomyosin coiled coils: implications for actin filament assembly and regulation.原肌球蛋白卷曲螺旋的形状和灵活性:对肌动蛋白丝组装和调节的影响。
J Mol Biol. 2010 Jan 15;395(2):327-39. doi: 10.1016/j.jmb.2009.10.060. Epub 2009 Oct 31.
5
CHARMM: the biomolecular simulation program.CHARMM:生物分子模拟程序。
J Comput Chem. 2009 Jul 30;30(10):1545-614. doi: 10.1002/jcc.21287.
6
Ca2+-dependent photocrosslinking of tropomyosin residue 146 to residues 157-163 in the C-terminal domain of troponin I in reconstituted skeletal muscle thin filaments.在重构的骨骼肌细肌丝中,原肌球蛋白残基146与肌钙蛋白I C末端结构域中的残基157 - 163发生Ca2+依赖的光交联。
J Mol Biol. 2009 Jun 12;389(3):575-83. doi: 10.1016/j.jmb.2009.04.027. Epub 2009 Apr 18.
7
Structure and orientation of troponin in the thin filament.细肌丝中肌钙蛋白的结构与取向
J Biol Chem. 2009 May 29;284(22):15007-15. doi: 10.1074/jbc.M808615200. Epub 2009 Mar 24.
8
PDBsum new things.蛋白质数据银行总结新内容。
Nucleic Acids Res. 2009 Jan;37(Database issue):D355-9. doi: 10.1093/nar/gkn860. Epub 2008 Nov 7.
9
Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T.原肌球蛋白在细(肌动蛋白)丝中的重叠结构基础以及肌钙蛋白-T产生分子旋转的机制
Proc Natl Acad Sci U S A. 2008 May 20;105(20):7200-5. doi: 10.1073/pnas.0801950105. Epub 2008 May 15.
10
Isoform-specific variation in the intrinsic disorder of troponin I.肌钙蛋白I内在无序性的亚型特异性变异。
Proteins. 2008 Nov 1;73(2):338-50. doi: 10.1002/prot.22063.

钙离子激活心肌细肌丝的模型。

A model of calcium activation of the cardiac thin filament.

机构信息

Department of Biophysics, Albert Einstein College of Medicine, Bronx, New York 10461, United States.

出版信息

Biochemistry. 2011 Aug 30;50(34):7405-13. doi: 10.1021/bi200506k. Epub 2011 Aug 5.

DOI:10.1021/bi200506k
PMID:21797264
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3165030/
Abstract

The cardiac thin filament regulates actomyosin interactions through calcium-dependent alterations in the dynamics of cardiac troponin and tropomyosin. Over the past several decades, many details of the structure and function of the cardiac thin filament and its components have been elucidated. We propose a dynamic, complete model of the thin filament that encompasses known structures of cardiac troponin, tropomyosin, and actin and show that it is able to capture key experimental findings. By performing molecular dynamics simulations under two conditions, one with calcium bound and the other without calcium bound to site II of cardiac troponin C (cTnC), we found that subtle changes in structure and protein contacts within cardiac troponin resulted in sweeping changes throughout the complex that alter tropomyosin (Tm) dynamics and cardiac troponin--actin interactions. Significant calcium-dependent changes in dynamics occur throughout the cardiac troponin complex, resulting from the combination of the following: structural changes in the N-lobe of cTnC at and adjacent to sites I and II and the link between them; secondary structural changes of the cardiac troponin I (cTnI) switch peptide, of the mobile domain, and in the vicinity of residue 25 of the N-terminus; secondary structural changes in the cardiac troponin T (cTnT) linker and Tm-binding regions; and small changes in cTnC-cTnI and cTnT-Tm contacts. As a result of these changes, we observe large changes in the dynamics of the following regions: the N-lobe of cTnC, the mobile domain of cTnI, the I-T arm, the cTnT linker, and overlapping Tm. Our model demonstrates a comprehensive mechanism for calcium activation of the cardiac thin filament consistent with previous, independent experimental findings. This model provides a valuable tool for research into the normal physiology of cardiac myofilaments and a template for studying cardiac thin filament mutations that cause human cardiomyopathies.

摘要

肌钙蛋白和原肌球蛋白的动力学变化通过钙离子依赖性调节肌球蛋白-肌动蛋白相互作用,使心脏细肌丝发挥功能。在过去的几十年中,心脏细肌丝及其组成部分的结构和功能的许多细节已经阐明。我们提出了一个心脏细肌丝的动态、完整模型,包括已知的心脏肌钙蛋白、原肌球蛋白和肌动蛋白的结构,并展示了它能够捕捉到关键的实验发现。通过在两种条件下进行分子动力学模拟,一种是钙结合,另一种是钙不结合到心脏肌钙蛋白 C(cTnC)的 II 位,我们发现心脏肌钙蛋白中的结构和蛋白接触的细微变化导致整个复合物发生广泛变化,改变原肌球蛋白(Tm)动力学和心脏肌钙蛋白-肌动蛋白相互作用。由于以下原因,心脏肌钙蛋白复合物中发生了显著的钙离子依赖性动力学变化:cTnC 的 N 端结构域在 I 位和 II 位及其连接部位的结构变化;心脏肌钙蛋白 I(cTnI)开关肽、可移动结构域和 N 端 25 位残基附近的二级结构变化;心脏肌钙蛋白 T(cTnT)连接区和 Tm 结合区的二级结构变化;以及 cTnC-cTnI 和 cTnT-Tm 接触的微小变化。由于这些变化,我们观察到以下区域的动力学发生了很大变化:cTnC 的 N 端结构域、cTnI 的可移动结构域、I-T 臂、cTnT 连接区和重叠的 Tm。我们的模型提供了一个全面的机制,用于解释钙离子激活心脏细肌丝的过程,与以前的独立实验发现一致。该模型为研究心脏肌丝的正常生理学提供了有价值的工具,也为研究导致人类心肌病的心脏细肌丝突变提供了模板。