Suppr超能文献

嗜热栖热菌PF2050(DUF2666蛋白家族成员)的过表达、结晶及初步X射线晶体学分析

Overexpression, crystallization and preliminary X-ray crystallographic analysis of Pyrococcus furiosus PF2050, a member of the DUF2666 protein family.

作者信息

Han Byeong-Gu, Lee Byung Il

机构信息

Cancer Cell and Molecular Biology Branch, Division of Cancer Biology, Research Institute, National Cancer Center, Goyang, Gyeonggi, Republic of Korea.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Aug 1;67(Pt 8):930-2. doi: 10.1107/S1744309111023888. Epub 2011 Jul 20.

Abstract

Pyrococcus furiosus PF2050, a putative uncharacterized protein, was overexpressed in Escherichia coli, purified and crystallized at 298 K using 2-methyl-2,4-pentanediol as the precipitant. X-ray diffraction data were collected to a resolution of 1.56 Å at 100 K using synchrotron X-rays. The crystal was found to belong to space group P2(1), with unit-cell parameters a = 41.76, b = 66.43, c = 46.38 Å, β = 96.62°. The asymmetric unit contained one subunit of PF2050, with a crystal volume per protein weight (V(M)) of 2.21 Å(3) Da(-1) and a solvent content of 44.41%.

摘要

嗜热栖热菌PF2050是一种假定的未鉴定蛋白质,在大肠杆菌中过表达,经纯化后,以2-甲基-2,4-戊二醇作为沉淀剂,于298K下进行结晶。使用同步加速器X射线在100K下收集到分辨率为1.56Å的X射线衍射数据。该晶体属于空间群P2(1),晶胞参数为a = 41.76、b = 66.43、c = 46.38Å,β = 96.62°。不对称单元包含一个PF2050亚基,每蛋白质量的晶体体积(V(M))为2.21Å(3)Da(-1),溶剂含量为44.41%。

相似文献

1
Overexpression, crystallization and preliminary X-ray crystallographic analysis of Pyrococcus furiosus PF2050, a member of the DUF2666 protein family.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Aug 1;67(Pt 8):930-2. doi: 10.1107/S1744309111023888. Epub 2011 Jul 20.
2
Crystal structure of Pyrococcus furiosus PF2050, a member of the DUF2666 protein family.
FEBS Lett. 2012 May 7;586(9):1384-8. doi: 10.1016/j.febslet.2012.04.004. Epub 2012 Apr 13.
3
Crystallization of [Fe3S4]-ferredoxin from the hyperthermophile archaeon Pyrococcus furiosus.
Acta Crystallogr D Biol Crystallogr. 2003 Dec;59(Pt 12):2325-7. doi: 10.1107/s0907444903021267. Epub 2003 Nov 27.
4
Crystallization and preliminary X-ray analysis of PH1010 from Pyrococcus horikoshii OT3, a member of the archaeal DUF54 family of proteins.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jun 1;63(Pt 6):532-4. doi: 10.1107/S1744309107024487. Epub 2007 May 31.
5
Crystalization and preliminary X-ray crystallographic analysis of the laminarinase endo-beta-1,3-glucanase from Pyrococcus furiosus.
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 2):2394-5. doi: 10.1107/s090744490402904x.
6
Crystallization and preliminary crystallographic study of DNA polymerase from Pyrococcus furiosus.
Protein Pept Lett. 2007;14(4):403-5. doi: 10.2174/092986607780363853.
7
Cloning, purification, crystallization and preliminary crystallographic analysis of a hypothetical acetyltransferase from Pyrococcus furiosus.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Mar 1;61(Pt 3):269-70. doi: 10.1107/S174430910500223X. Epub 2005 Feb 8.
8
Crystallization and quaternary structure analysis of an Lrp-like regulatory protein from the hyperthermophile Pyrococcus furiosus.
Acta Crystallogr D Biol Crystallogr. 2001 Jun;57(Pt 6):886-8. doi: 10.1107/s0907444901005261. Epub 2001 May 25.
9
Structure of the hypothetical protein PF0899 from Pyrococcus furiosus at 1.85 A resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jul 1;63(Pt 7):549-52. doi: 10.1107/S1744309107024049. Epub 2007 Jun 11.
10
Crystallization and X-ray diffraction analysis of a catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Aug 1;62(Pt 8):791-3. doi: 10.1107/S1744309106026157. Epub 2006 Jul 25.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
DUFs: families in search of function.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Oct 1;66(Pt 10):1148-52. doi: 10.1107/S1744309110001685. Epub 2010 Mar 5.
3
The Pfam protein families database.
Nucleic Acids Res. 2010 Jan;38(Database issue):D211-22. doi: 10.1093/nar/gkp985. Epub 2009 Nov 17.
4
Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology.
Methods Enzymol. 2001;330:134-57. doi: 10.1016/s0076-6879(01)30372-5.
5
SMART, a simple modular architecture research tool: identification of signaling domains.
Proc Natl Acad Sci U S A. 1998 May 26;95(11):5857-64. doi: 10.1073/pnas.95.11.5857.
6
Solvent content of protein crystals.
J Mol Biol. 1968 Apr 28;33(2):491-7. doi: 10.1016/0022-2836(68)90205-2.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验