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优化线性和支链烷烃与水的相互作用以模拟疏水水合作用。

Optimization of linear and branched alkane interactions with water to simulate hydrophobic hydration.

机构信息

Department of Chemical and Biomolecular Engineering, Tulane University, New Orleans, Louisiana 70118, USA.

出版信息

J Chem Phys. 2011 Aug 7;135(5):054510. doi: 10.1063/1.3623267.

Abstract

Previous studies of simple gas hydration have demonstrated that the accuracy of molecular simulations at capturing the thermodynamic signatures of hydrophobic hydration is linked both to the fidelity of the water model at replicating the experimental liquid density at ambient pressure and an accounting of polarization interactions between the solute and water. We extend those studies to examine alkane hydration using the transferable potentials for phase equilibria united-atom model for linear and branched alkanes, developed to reproduce alkane phase behavior, and the TIP4P/2005 model for water, which provides one of the best descriptions of liquid water for the available fixed-point charge models. Alkane site/water oxygen Lennard-Jones cross interactions were optimized to reproduce the experimental alkane hydration free energies over a range of temperatures. The optimized model reproduces the hydration free energies of the fitted alkanes with a root mean square difference between simulation and experiment of 0.06 kcal/mol over a wide temperature range, compared to 0.44 kcal/mol for the parent model. The optimized model accurately reproduces the temperature dependence of hydrophobic hydration, as characterized by the hydration enthalpies, entropies, and heat capacities, as well as the pressure response, as characterized by partial molar volumes.

摘要

先前对简单气体水合作用的研究表明,分子模拟在捕捉疏水性水合的热力学特征方面的准确性既与在环境压力下复制实验液体密度的水模型的保真度有关,也与溶质和水之间的极化相互作用有关。我们扩展了这些研究,使用可传递相平衡联合原子模型研究烷烃水合作用,该模型是为复制烷烃相行为而开发的,以及 TIP4P/2005 水模型,该模型为可用的固定点电荷模型提供了对液态水的最佳描述之一。烷烃位点/水氧 Lennard-Jones 交叉相互作用进行了优化,以在一系列温度下再现实验烷烃水合自由能。优化后的模型在很宽的温度范围内,将拟合烷烃的水合自由能的模拟值与实验值之间的均方根差缩小到 0.06 kcal/mol,而原始模型为 0.44 kcal/mol。优化后的模型准确地再现了疏水性水合的温度依赖性,这可以通过水合焓、熵和热容以及压力响应来表征,如偏摩尔体积。

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