Department of Structural Biology, School of Medicine, University of Pittsburgh, Biomedical Science Tower 3, Pittsburgh, PA 15260, USA.
Structure. 2011 Aug 10;19(8):1170-81. doi: 10.1016/j.str.2011.05.010.
The cyanobacterial Oscillatory Agardhii agglutinin (OAA) is a recently discovered HIV-inactivating lectin that interacts with high-mannose sugars. Nuclear magnetic resonance (NMR) binding studies between OAA and α3,α6-mannopentaose (Manα(1-3)[Manα(1-3)[Manα(1-6)]Manα(1-6)]Man), the branched core unit of Man-9, revealed two binding sites at opposite ends of the protein, exhibiting essentially identical affinities. Atomic details of the specific protein-sugar contacts in the recognition loops of OAA were delineated in the high-resolution crystal structures of free and glycan-complexed protein. No major changes in the overall protein structure are induced by carbohydrate binding, with essentially identical apo- and sugar-bound conformations in binding site 1. A single peptide bond flip at W77-G78 is seen in binding site 2. Our combined NMR and crystallographic results provide structural insights into the mechanism by which OAA specifically recognizes the branched Man-9 core, distinctly different from the recognition of the D1 and D3 arms at the nonreducing end of high-mannose carbohydrates by other antiviral lectins.
蓝藻 Oscillatory Agardhii 凝集素 (OAA) 是一种最近发现的 HIV 失活凝集素,它与高甘露糖糖相互作用。OAA 与 α3,α6-甘露五糖 (Manα(1-3)[Manα(1-3)[Manα(1-6)]Manα(1-6)]Man) 之间的核磁共振 (NMR) 结合研究,是甘露糖-9 的支化核心单元,在蛋白质的相对两端揭示了两个结合位点,表现出基本相同的亲和力。在游离和糖复合物蛋白的高分辨率晶体结构中,详细描述了 OAA 识别环中特定蛋白-糖相互作用的原子细节。碳水化合物结合不会引起蛋白质整体结构的重大变化,结合位点 1 中存在基本相同的无配体和糖结合构象。在结合位点 2 中观察到 W77-G78 处单个肽键翻转。我们的 NMR 和晶体学综合结果提供了结构见解,了解了 OAA 特异性识别支化 Man-9 核心的机制,这与其他抗病毒凝集素识别高甘露糖碳水化合物非还原端的 D1 和 D3 臂的机制明显不同。