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海沙黄杆菌属新种,黄杆菌科的一个成员,从海洋沙中分离得到。

Cellulophaga geojensis sp. nov., a member of the family Flavobacteriaceae isolated from marine sand.

机构信息

Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yuseong, Daejeon, Republic of Korea.

Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2012 Jun;62(Pt 6):1354-1358. doi: 10.1099/ijs.0.033340-0. Epub 2011 Aug 5.

Abstract

A Gram-stain-negative, aerobic, non-flagellated, non-spore-forming, motile (by gliding) bacterial strain, designated M-M6(T), was isolated from marine sand of Geoje island, Korea. Strain M-M6(T) grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of 2 % (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain M-M6(T) fell within the clade comprising Cellulophaga species, forming a coherent cluster with Cellulophaga lytica ATCC 23178(T) and Cellulophaga fucicola NN015860(T), with which it shared 16S rRNA gene sequence similarities of 98.1 and 98.2 %, respectively. Sequence similarities between strain M-M6(T) and the type strains of other recognized Cellulophaga species were in the range 92.4-93.8 %. Strain M-M6(T) contained MK-6 as the predominant menaquinone and iso-C(15:0), iso-C(15:1) G, iso-C(17:0) 3-OH, and C(16:1)ω7c and/or iso-C(15:0) 2-OH as the major fatty acids. The major polar lipids detected in strain M-M6(T) and the type strains of C. lytica and C. fucicola were two unidentified lipids, one unidentified aminolipid and one unidentified aminophospholipid. The DNA G+C content of strain M-M6(T) was 35.4 mol%. Levels of DNA-DNA relatedness between strain M-M6(T) and C. lytica JCM 8516(T) and C. fucicola JCM 21778(T) were 33 and 35 %, respectively. Differential phenotypic properties and phylogenetic and genetic distinctiveness distinguished strain M-M6(T) from all recognized Cellulophaga species. On the basis of the data presented, strain M-M6(T) is considered to represent a novel species of the genus Cellulophaga, for which the name Cellulophaga geojensis sp. nov. is proposed. The type strain is M-M6(T) ( = KCTC 23498(T) = CCUG 60801(T)).

摘要

一株革兰氏阴性、需氧、不产鞭毛、不产芽孢、可滑行运动的细菌菌株,被命名为 M-M6(T),从韩国巨济岛的海洋沙中分离得到。菌株 M-M6(T) 在 25°C、pH7.0-8.0 和 2%(w/v)NaCl 的存在下生长最佳。基于 16S rRNA 基因序列的系统发育分析表明,菌株 M-M6(T) 属于纤维弧菌属,与纤维弧菌属 Lytica ATCC 23178(T) 和纤维弧菌属 Fucicola NN015860(T) 形成一个连贯的聚类,与它们的 16S rRNA 基因序列相似度分别为 98.1%和 98.2%。菌株 M-M6(T) 与其他公认的纤维弧菌属的模式菌株之间的序列相似度在 92.4-93.8%之间。菌株 M-M6(T) 含有 MK-6 作为主要的menaquinone 和 iso-C(15:0)、iso-C(15:1) G、iso-C(17:0) 3-OH 和 C(16:1)ω7c 和/或 iso-C(15:0) 2-OH 作为主要脂肪酸。在菌株 M-M6(T) 和纤维弧菌属 Lytica 和纤维弧菌属 Fucicola 的模式菌株中检测到的主要极性脂质是两种未鉴定的脂质、一种未鉴定的胺脂和一种未鉴定的胺磷脂。菌株 M-M6(T) 的 DNA G+C 含量为 35.4mol%。菌株 M-M6(T) 与纤维弧菌属 Lytica JCM 8516(T) 和纤维弧菌属 Fucicola JCM 21778(T) 之间的 DNA-DNA 同源性水平分别为 33%和 35%。菌株 M-M6(T) 在表型特征、系统发育和遗传上与所有已识别的纤维弧菌属物种都有明显的区别。基于提供的数据,菌株 M-M6(T) 被认为代表了纤维弧菌属的一个新种,因此提议将其命名为 Geojensis 属的 Cellulophaga geojensis sp. nov.。该模式菌株为 M-M6(T)(=KCTC 23498(T)=CCUG 60801(T))。

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