Inserm, U955, Créteil, France.
Am J Respir Crit Care Med. 2011 Nov 15;184(10):1164-70. doi: 10.1164/rccm.201103-0548OC. Epub 2011 Aug 11.
Bronchopulmonary dysplasia is the most common chronic respiratory disease in premature infants. Genetic factors might contribute to bronchopulmonary dysplasia susceptibility.
To identify genetic variants involved in bronchopulmonary dysplasia through a genome-wide association study.
We prospectively evaluated 418 premature neonates (gestational age <28 wk), of whom 22% developed bronchopulmonary dysplasia. Two discovery series were created, using a DNA pooling strategy in neonates from white and African ancestry. Polymorphisms associated with the disease were confirmed in an independent replication population. Genes were then explored by fine mapping and associations were replicated in an external Finnish population of 213 neonates. Validated genes expression patterns were studied in rat lung, after air or hyperoxia exposure.
SPOCK2 gene was identified by both discovery series. The most significant polymorphism (rs1245560; P = 1.66 × 10(-7)) was confirmed by individual genotyping, and in the replication population (P = 0.002). Fine mapping confirmed the association of rs1245560 with bronchopulmonary dysplasia in both white and African populations with adjusted odds ratios of 2.96 (95% confidence interval [CI], 1.37-6.40) and 4.87 (95% CI, 1.88-12.63), respectively. In white neonates, rs1049269 was also associated with the disease (odds ratio, 3.21; 95% CI, 1.51-6.82). These associations were replicated in the Finnish population. In newborn rat lungs, SPOCK2 mRNA levels markedly increased during the alveolar stage of lung development. After rat exposure to hyperoxia, SPOCK2 expression increased relative to air-exposed controls.
We identified SPOCK2 as a new possible candidate susceptibility gene for bronchopulmonary dysplasia. Its lung expression pattern points toward a potential role in alveolarization.
支气管肺发育不良是早产儿最常见的慢性呼吸系统疾病。遗传因素可能与支气管肺发育不良的易感性有关。
通过全基因组关联研究确定与支气管肺发育不良相关的遗传变异。
我们前瞻性评估了 418 名早产儿(胎龄<28 周),其中 22%发生了支气管肺发育不良。使用来自白人和非洲裔的新生儿 DNA 池策略创建了两个发现系列。在一个独立的复制人群中证实了与该疾病相关的多态性。然后通过精细映射探索基因,并在一个 213 名新生儿的芬兰外部人群中复制关联。研究了经过空气或高氧暴露后的大鼠肺中验证基因的表达模式。
通过两个发现系列确定了 SPOCK2 基因。最显著的多态性(rs1245560;P=1.66×10(-7))通过个体基因分型和复制人群(P=0.002)得到证实。精细映射证实了 rs1245560 与白人和非洲人群中支气管肺发育不良的关联,调整后的优势比分别为 2.96(95%置信区间[CI],1.37-6.40)和 4.87(95% CI,1.88-12.63)。在白人新生儿中,rs1049269 也与该疾病相关(优势比,3.21;95% CI,1.51-6.82)。这些关联在芬兰人群中得到了复制。在新生大鼠肺中,SPOCK2 mRNA 水平在肺发育的肺泡期显著增加。与空气暴露对照组相比,大鼠暴露于高氧后 SPOCK2 的表达增加。
我们确定 SPOCK2 为支气管肺发育不良的新候选易感基因。其肺部表达模式表明其在肺泡化中可能发挥作用。