Abteilung für Mikrobiologie, ZIEL, Technische Universität München, D-85354 Freising, Germany.
Lehrstuhl für Mikrobielle Ökologie, Department für Grundlagen der Biowissenschaften, WZW, Technische Universität München, D-85350 Freising, Germany.
Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1506-1511. doi: 10.1099/ijs.0.036327-0. Epub 2011 Aug 19.
Four non-fermenting, rod-shaped, Gram-staining-negative bacterial strains, designated WCC 4512(T), WS 4555, WCC 4521(T) and WS 4556, were isolated from raw milk and the dairy environment. Phylogenetic analyses based on 16S rRNA and groEL gene sequences demonstrated the affiliation of the four strains to two distinct clusters within the class Sphingobacteriia, phylum 'Bacteroidetes'. Strains WCC 4512(T) and WS 4555 showed the highest 16S rRNA gene sequence similarity to the type strain of S. daejeonense (97.3 and 97.2%, respectively), whereas strains WCC 4521(T) and WS 4556 were most closely related to S. composti LMG 23401(T) (97.6% 16S rRNA gene sequence similarity). The DNA G+C contents of strains WCC 4512(T) and WCC 4521(T) were 44.2 and 39.3 mol%, respectively. The major cellular fatty acids and the presence of menaquinone MK-7 as the predominant quinone for both strains WCC 4512(T) and WCC 4521(T) supported their affiliation to the genus Sphingobacterium. DNA-DNA hybridization experiments between strain WCC 4512(T) and S. daejeonense LMG 23402(T) and between strain WCC 4521(T) and S. composti LMG 23401(T) revealed DNA relatedness values of 2% (repetition, 3%) and 8% (repetition, 17%), respectively. On the basis of phenotypic and genetic properties, as well as phylogenetic distinctiveness, it is suggested that the four strains represent two novel Sphingobacterium species with strain WCC 4512(T) (=DSM 22361(T)=LMG 25272(T)) as the type strain of Sphingobacterium lactis sp. nov. (WS 4555 is a reference strain of S. lactis) and strain WCC 4521(T) (=DSM 22362(T)=LMG 25273(T)) as the type strain of Sphingobacterium alimentarium sp. nov. (WS 4556 is a reference strain of S. alimentarium).
从生牛乳和乳制品环境中分离到 4 株非发酵、杆状、革兰氏染色阴性细菌,分别命名为 WCC 4512(T)、WS 4555、WCC 4521(T)和 WS 4556。基于 16S rRNA 和 groEL 基因序列的系统发育分析表明,这 4 株菌属于鞘氨醇单胞菌科的两个不同聚类,门为拟杆菌门。菌株 WCC 4512(T)和 WS 4555 与典型菌株 S. daejeonense 的 16S rRNA 基因序列相似性最高(分别为 97.3%和 97.2%),而菌株 WCC 4521(T)和 WS 4556 与 S. composti LMG 23401(T)的相似性最高(16S rRNA 基因序列相似性为 97.6%)。菌株 WCC 4512(T)和 WCC 4521(T)的 DNA G+C 含量分别为 44.2%和 39.3mol%。菌株 WCC 4512(T)和 WCC 4521(T)的主要细胞脂肪酸和menaquinone MK-7 作为两者的主要醌,支持它们归属于鞘氨醇单胞菌属。菌株 WCC 4512(T)与 S. daejeonense LMG 23402(T)和菌株 WCC 4521(T)与 S. composti LMG 23401(T)之间的 DNA-DNA 杂交实验显示,菌株 WCC 4512(T)与 S. daejeonense LMG 23402(T)的 DNA 相关性值为 2%(重复,3%),菌株 WCC 4521(T)与 S. composti LMG 23401(T)的 DNA 相关性值为 8%(重复,17%)。基于表型和遗传特性以及系统发育的独特性,建议这 4 株菌代表两个新的鞘氨醇单胞菌属物种,其中菌株 WCC 4512(T)(=DSM 22361(T)=LMG 25272(T))为 lactis sp. nov. 的模式种(WS 4555 为 lactis sp. nov. 的参考菌株),菌株 WCC 4521(T)(=DSM 22362(T)=LMG 25273(T))为 alimentarium sp. nov. 的模式种(WS 4556 为 alimentarium sp. nov. 的参考菌株)。