Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA 95616, USA.
J Phys Condens Matter. 2011 Sep 21;23(37):374102. doi: 10.1088/0953-8984/23/37/374102. Epub 2011 Aug 23.
We use linear stability analysis and numerical solutions of partial differential equations to investigate pattern formation in the one-dimensional system of short dynamic polymers and one (plus-end directed) or two (one is plus-end, another minus-end directed) molecular motors. If polymer sliding and motor gliding rates are slow and/or the polymer turnover rate is fast, then the polymer-motor bundle has mixed polarity and homogeneous motor distribution. However, if motor gliding is fast, a sarcomeric pattern with periodic bands of alternating polymer polarity separated by motor aggregates evolves. On the other hand, if polymer sliding is fast, a graded-polarity bundle with motors at the center emerges. In the presence of the second, minus-end directed motor, the sarcomeric pattern is more ubiquitous, while the graded-polarity pattern is destabilized. However, if the minus-end motor is weaker than the plus-end directed one, and/or polymer nucleation is autocatalytic, and/or long polymers are present in the bundle, then a spindle-like architecture with a sorted-out polarity emerges with the plus-end motors at the center and minus-end motors at the edges. We discuss modeling implications for actin-myosin fibers and in vitro and meiotic spindles.
我们使用线性稳定性分析和偏微分方程的数值解来研究一维短动态聚合物系统和一个(正端定向)或两个(一个是正端,另一个是负端定向)分子马达中的模式形成。如果聚合物滑动和马达滑行速度较慢,并且/或者聚合物周转率较快,则聚合物-马达束具有混合极性和均匀的马达分布。然而,如果马达滑行速度较快,则会出现具有周期性带交替聚合物极性的肌节图案,由马达聚集体隔开。另一方面,如果聚合物滑动速度较快,则会出现具有中心马达的渐变极性束。在存在第二个负端定向马达的情况下,肌节图案更为普遍,而渐变极性图案则不稳定。然而,如果负端马达比正端定向马达弱,并且/或者聚合物成核是自催化的,并且/或者长聚合物存在于束中,则会出现具有分类极性的纺锤形结构,带有中心的正端马达和边缘的负端马达。我们讨论了对肌动球蛋白纤维以及体外和减数分裂纺锤体的建模意义。