Caspi Jonathan, Barak Yoav, Haimovitz Rachel, Gilary Hadar, Irwin Diana C, Lamed Raphael, Wilson David B, Bayer Edward A
Syst Synth Biol. 2010 Sep;4(3):193-201. doi: 10.1007/s11693-010-9056-1. Epub 2010 Apr 30.
Cellulosomes are efficient cellulose-degradation systems produced by selected anaerobic bacteria. This multi-enzyme complex is assembled from a group of cellulases attached to a protein scaffold termed scaffoldin, mediated by a high-affinity protein-protein interaction between the enzyme-borne dockerin module and the cohesin module of the scaffoldin. The enzymatic complex is attached as a whole to the cellulosic substrate via a cellulose-binding module (CBM) on the scaffoldin subunit. In previous works, we have employed a synthetic biology approach to convert several of the free cellulases of the aerobic bacterium, Thermobifida fusca, into the cellulosomal mode by replacing each of the enzymes' CBM with a dockerin. Here we show that although family six enzymes are not a part of any known cellulosomal system, the two family six enzymes of the T. fusca system (endoglucanase Cel6A and exoglucanase Cel6B) can be converted to work as cellulosomal enzymes. Indeed, the chimaeric dockerin-containing family six endoglucanase worked well as a cellulosomal enzyme, and proved to be more efficient than the parent enzyme when present in designer cellulosomes. In stark contrast, the chimaeric family six exoglucanase was markedly less efficient than the wild-type enzyme when mixed with other T. fusca cellulases, thus indicating its incompatibility with the cellulosomal mode of action.
纤维小体是由特定厌氧细菌产生的高效纤维素降解系统。这种多酶复合体由一组附着在被称为脚手架蛋白的蛋白质支架上的纤维素酶组装而成,其介导过程是通过酶携带的坞站蛋白模块与脚手架蛋白的粘着蛋白模块之间的高亲和力蛋白质-蛋白质相互作用实现的。该酶复合体通过脚手架蛋白亚基上的纤维素结合模块(CBM)整体附着在纤维素底物上。在之前的研究中,我们采用合成生物学方法,通过用坞站蛋白替换需氧细菌嗜热栖热放线菌的几种游离纤维素酶的每个CBM,将其转化为纤维小体模式。在这里我们表明,尽管第六家族酶并非任何已知纤维小体系统的一部分,但嗜热栖热放线菌系统的两种第六家族酶(内切葡聚糖酶Cel6A和外切葡聚糖酶Cel6B)可以转化为纤维小体酶发挥作用。事实上,含有嵌合坞站蛋白的第六家族内切葡聚糖酶作为纤维小体酶表现良好,并且在设计的纤维小体中存在时,被证明比亲本酶更有效。与之形成鲜明对比的是,当与其他嗜热栖热放线菌纤维素酶混合时,嵌合的第六家族外切葡聚糖酶的效率明显低于野生型酶,因此表明其与纤维小体作用模式不兼容。