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嗜热硫还原菌海氏海栖热袍菌模式菌株(MH(2))的全基因组序列

Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH(2)).

作者信息

Huntemann Marcel, Lu Megan, Nolan Matt, Lapidus Alla, Lucas Susan, Hammon Nancy, Deshpande Shweta, Cheng Jan-Fang, Tapia Roxanne, Han Cliff, Goodwin Lynne, Pitluck Sam, Liolios Konstantinos, Pagani Ioanna, Ivanova Natalia, Ovchinikova Galina, Pati Amrita, Chen Amy, Palaniappan Krishna, Land Miriam, Hauser Loren, Jeffries Cynthia D, Detter John C, Brambilla Evelyne-Marie, Rohde Manfred, Spring Stefan, Göker Markus, Woyke Tanja, Bristow James, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Kyrpides Nikos C, Klenk Hans-Peter, Mavromatis Konstantinos

出版信息

Stand Genomic Sci. 2011 Jul 1;4(3):303-11. doi: 10.4056/sigs.1814460. Epub 2011 Jun 30.

Abstract

Hippea maritima (Miroshnichenko et al. 1999) is the type species of the genus Hippea, which belongs to the family Desulfurellaceae within the class Deltaproteobacteria. The anaerobic, moderately thermophilic marine sulfur-reducer was first isolated from shallow-water hot vents in Matipur Harbor, Papua New Guinea. H. maritima was of interest for genome sequencing because of its isolated phylogenetic location, as a distant next neighbor of the genus Desulfurella. Strain MH(2) (T) is the first type strain from the order Desulfurellales with a completely sequenced genome. The 1,694,430 bp long linear genome with its 1,723 protein-coding and 57 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

摘要

海氏希佩菌(Miroshnichenko等人,1999年)是希佩菌属的模式种,该属属于δ-变形菌纲脱硫弧菌科。这种厌氧、中度嗜热的海洋硫还原菌最初是从巴布亚新几内亚马蒂普尔港的浅水热液喷口中分离出来的。由于其独特的系统发育位置,作为脱硫弧菌属的远亲,海氏希佩菌成为基因组测序的研究对象。菌株MH(2) (T)是脱硫弧菌目第一个全基因组测序的模式菌株。这个长度为1,694,430 bp的线性基因组包含1,723个蛋白质编码基因和57个RNA基因,由一条环状染色体组成,是细菌和古菌基因组百科全书项目的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5224/3156395/eb7a7650a93b/sigs.1814460-f1.jpg

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