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迟缓库特氏菌模式菌株(编号33)的全基因组序列

Complete genome sequence of Tsukamurella paurometabola type strain (no. 33).

作者信息

Munk A Christine, Lapidus Alla, Lucas Susan, Nolan Matt, Tice Hope, Cheng Jan-Fang, Del Rio Tijana Glavina, Goodwin Lynne, Pitluck Sam, Liolios Konstantinos, Huntemann Marcel, Ivanova Natalia, Mavromatis Konstantinos, Mikhailova Natalia, Pati Amrita, Chen Amy, Palaniappan Krishna, Tapia Roxanne, Han Cliff, Land Miriam, Hauser Loren, Chang Yun-Juan, Jeffries Cynthia D, Brettin Thomas, Yasawong Montri, Brambilla Evelyne-Marie, Rohde Manfred, Sikorski Johannes, Göker Markus, Detter John C, Woyke Tanja, Bristow James, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Kyrpides Nikos C, Klenk Hans-Peter

出版信息

Stand Genomic Sci. 2011 Jul 1;4(3):342-51. doi: 10.4056/sigs.1894556. Epub 2011 Jun 30.

DOI:10.4056/sigs.1894556
PMID:21886861
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3156402/
Abstract

Tsukamurella paurometabola corrig. (Steinhaus 1941) Collins et al. 1988 is the type species of the genus Tsukamurella, which is the type genus to the family Tsukamurellaceae. The species is not only of interest because of its isolated phylogenetic location, but also because it is a human opportunistic pathogen with some strains of the species reported to cause lung infection, lethal meningitis, and necrotizing tenosynovitis. This is the first completed genome sequence of a member of the genus Tsukamurella and the first genome sequence of a member of the family Tsukamurellaceae. The 4,479,724 bp long genome contains a 99,806 bp long plasmid and a total of 4,335 protein-coding and 56 RNA genes, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

摘要

迟缓冢村菌(修订名)(斯坦豪斯,1941年)柯林斯等人,1988年,是冢村菌属的模式种,而该属是冢村菌科的模式属。该物种不仅因其独特的系统发育位置而备受关注,还因其是一种人类机会致病菌,据报道该物种的一些菌株可引起肺部感染、致死性脑膜炎和坏死性腱鞘炎。这是冢村菌属成员的首个完整基因组序列,也是冢村菌科成员的首个基因组序列。这个长度为4,479,724 bp的基因组包含一个长度为99,806 bp的质粒,共有4,335个蛋白质编码基因和56个RNA基因,是细菌和古菌基因组百科全书项目的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f84/3156402/7ffc0d87a3ac/sigs.1894556-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f84/3156402/a47cc983d460/sigs.1894556-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f84/3156402/ac1bfd3ad973/sigs.1894556-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f84/3156402/7ffc0d87a3ac/sigs.1894556-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f84/3156402/a47cc983d460/sigs.1894556-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f84/3156402/ac1bfd3ad973/sigs.1894556-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f84/3156402/7ffc0d87a3ac/sigs.1894556-f3.jpg

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