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本文引用的文献

1
Substrate activation by iron superoxo intermediates.铁过氧亚硝酰中间体的底物激活。
Curr Opin Struct Biol. 2010 Dec;20(6):673-83. doi: 10.1016/j.sbi.2010.08.005. Epub 2010 Oct 14.
2
Cryoreduction of the NO-adduct of taurine:alpha-ketoglutarate dioxygenase (TauD) yields an elusive {FeNO}(8) species.牛磺酸-α-酮戊二酸双加氧酶(TauD)的一氧化氮加合物的低温还原生成一种难以捉摸的{FeNO}(8)物种。
J Am Chem Soc. 2010 Apr 7;132(13):4739-51. doi: 10.1021/ja909715g.
3
Accurate calculation of zero-field splittings of (bio)inorganic complexes: application to an FeNO7 (S = 3/2) compound.准确计算(生物)无机配合物的零场分裂:在一个 FeNO7(S = 3/2)化合物中的应用。
J Phys Chem A. 2009 Aug 13;113(32):9150-6. doi: 10.1021/jp8107667.
4
Versatility of biological non-heme Fe(II) centers in oxygen activation reactions.生物非血红素铁(II)中心在氧活化反应中的多功能性。
Nat Chem Biol. 2008 Mar;4(3):186-93. doi: 10.1038/nchembio.71.
5
VTVH-MCD and DFT studies of thiolate bonding to [FeNO]7/[FeO2]8 complexes of isopenicillin N synthase: substrate determination of oxidase versus oxygenase activity in nonheme Fe enzymes.异青霉素N合酶的[FeNO]7/[FeO2]8配合物与硫醇盐键合的VTVH-MCD和DFT研究:非血红素铁酶中氧化酶与加氧酶活性的底物测定
J Am Chem Soc. 2007 Jun 13;129(23):7427-38. doi: 10.1021/ja071364v. Epub 2007 May 17.
6
The diverse and pervasive chemistries of the alpha-keto acid dependent enzymes.α-酮酸依赖性酶的多样且普遍存在的化学性质。
J Biol Inorg Chem. 2007 Jun;12(5):587-601. doi: 10.1007/s00775-007-0231-0. Epub 2007 Apr 13.
7
Two interconverting Fe(IV) intermediates in aliphatic chlorination by the halogenase CytC3.卤化酶CytC3催化脂肪族氯化反应中的两种相互转化的Fe(IV)中间体。
Nat Chem Biol. 2007 Feb;3(2):113-6. doi: 10.1038/nchembio856. Epub 2007 Jan 14.
8
Spectroscopic and electronic structure studies of the role of active site interactions in the decarboxylation reaction of alpha-keto acid-dependent dioxygenases.α-酮酸依赖性双加氧酶脱羧反应中活性位点相互作用作用的光谱和电子结构研究。
J Inorg Biochem. 2006 Dec;100(12):2108-16. doi: 10.1016/j.jinorgbio.2006.08.021. Epub 2006 Sep 26.
9
Direct spectroscopic detection of a C-H-cleaving high-spin Fe(IV) complex in a prolyl-4-hydroxylase.脯氨酰-4-羟化酶中碳氢键裂解高自旋铁(IV)配合物的直接光谱检测
Proc Natl Acad Sci U S A. 2006 Oct 3;103(40):14738-43. doi: 10.1073/pnas.0604005103. Epub 2006 Sep 26.
10
Spectroscopic and electronic structure studies of aromatic electrophilic attack and hydrogen-atom abstraction by non-heme iron enzymes.非血红素铁酶对芳香亲电攻击和氢原子提取的光谱及电子结构研究。
Proc Natl Acad Sci U S A. 2006 Aug 29;103(35):12966-73. doi: 10.1073/pnas.0605067103. Epub 2006 Aug 18.

α-酮酸依赖性双加氧酶的激活:一种{FeNO}7/{FeO2}8 方法在氧活化初始步骤表征中的应用。

Activation of α-keto acid-dependent dioxygenases: application of an {FeNO}7/{FeO2}8 methodology for characterizing the initial steps of O2 activation.

机构信息

Department of Chemistry, Stanford University, Stanford, California 94305, United States.

出版信息

J Am Chem Soc. 2011 Nov 16;133(45):18148-60. doi: 10.1021/ja202549q. Epub 2011 Oct 21.

DOI:10.1021/ja202549q
PMID:21981763
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3212634/
Abstract

The α-keto acid-dependent dioxygenases are a major subgroup within the O(2)-activating mononuclear nonheme iron enzymes. For these enzymes, the resting ferrous, the substrate plus cofactor-bound ferrous, and the Fe(IV)═O states of the reaction have been well studied. The initial O(2)-binding and activation steps are experimentally inaccessible and thus are not well understood. In this study, NO is used as an O(2) analogue to probe the effects of α-keto acid binding in 4-hydroxyphenylpyruvate dioxygenase (HPPD). A combination of EPR, UV-vis absorption, magnetic circular dichroism (MCD), and variable-temperature, variable-field (VTVH) MCD spectroscopies in conjunction with computational models is used to explore the HPPD-NO and HPPD-HPP-NO complexes. New spectroscopic features are present in the α-keto acid bound {FeNO}(7) site that reflect the strong donor interaction of the α-keto acid with the Fe. This promotes the transfer of charge from the Fe to NO. The calculations are extended to the O(2) reaction coordinate where the strong donation associated with the bound α-keto acid promotes formation of a new, S = 1 bridged Fe(IV)-peroxy species. These studies provide insight into the effects of a strong donor ligand on O(2) binding and activation by Fe(II) in the α-keto acid-dependent dioxygenases and are likely relevant to other subgroups of the O(2) activating nonheme ferrous enzymes.

摘要

α-酮酸依赖性双加氧酶是 O(2)-激活的单核非血红素铁酶中的一个主要亚群。对于这些酶,已经对其静息态亚铁、底物加辅助因子结合态亚铁以及反应的 Fe(IV)═O 态进行了很好的研究。初始的 O(2)结合和激活步骤在实验上是不可及的,因此了解得还不够充分。在这项研究中,NO 被用作 O(2)类似物,以研究 α-酮酸结合对 4-羟基苯丙酮酸双加氧酶 (HPPD)的影响。EPR、UV-vis 吸收、磁圆二色性 (MCD)和变温变场 (VTVH)MCD 光谱学与计算模型相结合,用于探索 HPPD-NO 和 HPPD-HPP-NO 配合物。在 α-酮酸结合的 {FeNO}(7)位出现了新的光谱特征,反映了 α-酮酸与 Fe 的强烈供体相互作用。这促进了电荷从 Fe 向 NO 的转移。计算扩展到 O(2)反应坐标,其中与结合的 α-酮酸相关的强烈供体促进了新的 S = 1 桥接 Fe(IV)-过氧物种的形成。这些研究提供了关于强供体配体对 Fe(II)在 α-酮酸依赖性双加氧酶中 O(2)结合和激活的影响的深入了解,并且可能与其他 O(2)激活非血红素亚铁酶的亚群有关。