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本文引用的文献

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In vivo neuronal subtype-specific targets of Atoh1 (Math1) in dorsal spinal cord.在体脊髓背侧 Atoh1(Math1)对神经元亚型的特异性靶向。
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A novel function of the proneural factor Ascl1 in progenitor proliferation identified by genome-wide characterization of its targets.通过全基因组鉴定其靶标,发现神经前体细胞因子 Ascl1 在祖细胞增殖中的一个新功能。
Genes Dev. 2011 May 1;25(9):930-45. doi: 10.1101/gad.627811.
3
In vivo Atoh1 targetome reveals how a proneural transcription factor regulates cerebellar development.体内 Atoh1 靶标组揭示了一个神经前体细胞转录因子如何调节小脑发育。
Proc Natl Acad Sci U S A. 2011 Feb 22;108(8):3288-93. doi: 10.1073/pnas.1100230108. Epub 2011 Feb 7.
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The gene regulatory cascade linking proneural specification with differentiation in Drosophila sensory neurons.果蝇感觉神经元中与分化相关的神经前体细胞特化的基因调控级联。
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Transcriptional control of genes involved in ciliogenesis: a first step in making cilia.纤毛发生相关基因的转录调控:生成纤毛的第一步。
Biol Cell. 2010 Jul 9;102(9):499-513. doi: 10.1042/BC20100035.
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Robust target gene discovery through transcriptome perturbations and genome-wide enhancer predictions in Drosophila uncovers a regulatory basis for sensory specification.通过对果蝇转录组扰动和全基因组增强子预测的稳健靶基因发现,揭示了感觉特化的调控基础。
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Guiding neuronal cell migrations.引导神经元细胞迁移。
Cold Spring Harb Perspect Biol. 2010 Feb;2(2):a001834. doi: 10.1101/cshperspect.a001834.
8
Direct conversion of fibroblasts to functional neurons by defined factors.通过定义因子将成纤维细胞直接转化为功能性神经元。
Nature. 2010 Feb 25;463(7284):1035-41. doi: 10.1038/nature08797. Epub 2010 Jan 27.
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Neural stem cell transcriptional networks highlight genes essential for nervous system development.神经干细胞转录网络突出了神经系统发育所必需的基因。
EMBO J. 2009 Dec 16;28(24):3799-807. doi: 10.1038/emboj.2009.309.
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Engineering of dominant active basic helix-loop-helix proteins that are resistant to negative regulation by postnatal central nervous system antineurogenic cues.对产后中枢神经系统抗神经源性信号的负调控具有抗性的显性活性碱性螺旋-环-螺旋蛋白的工程设计。
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通过对其转录靶标的全基因组特征分析揭示了神经前体细胞因子的新老功能。

Old and new functions of proneural factors revealed by the genome-wide characterization of their transcriptional targets.

机构信息

Instituto Gulbenkian de Ciência, Oeiras, Portugal.

出版信息

Cell Cycle. 2011 Dec 1;10(23):4026-31. doi: 10.4161/cc.10.23.18578.

DOI:10.4161/cc.10.23.18578
PMID:22101262
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3272285/
Abstract

In the developing vertebrate nervous system, bHLH proneural factors such as Ascl1 are known to play important regulatory roles at different stages of the neurogenic differentiation process. In spite of the wealth of information gathered on the cellular functions of proneural factors, little was known of the molecular basis for their activities, and in particular of the identity of their target genes. The development of genomic approaches is making possible the characterization of transcriptional programs at an unprecedented scale. Recently, we have used a combination of genomic location analysis by ChIP-on-chip and expression profiling in order to characterize the proneural transcription program regulated by Ascl1 in the ventral telencephalon of the mouse embryonic brain. Our results demonstrate that Ascl1 directly controls successive steps of neurogenesis and provide a molecular frame for previously described Ascl1 functions. In addition, we uncovered an important but previously unrecognized role for Ascl1 in promoting the proliferation of neural progenitors. Here we discuss our recent findings and review them in light of efforts from other laboratories to characterize the transcriptional programs downstream various proneural factors.

摘要

在脊椎动物神经系统的发育过程中,bHLH 类神经前体细胞因子(如 Ascl1)被认为在神经发生分化过程的不同阶段发挥着重要的调控作用。尽管已经收集了大量关于神经前体细胞因子的细胞功能信息,但它们的作用机制,特别是其靶基因的身份,仍然知之甚少。基因组学方法的发展使得在前所未有的规模上对转录程序进行特征描述成为可能。最近,我们结合了 ChIP-on-chip 的基因组定位分析和胚胎脑腹侧端脑的表达谱分析,以描述 Ascl1 调控的神经前体细胞转录程序。我们的结果表明,Ascl1 直接控制神经发生的连续步骤,并为先前描述的 Ascl1 功能提供了分子框架。此外,我们还揭示了 Ascl1 促进神经祖细胞增殖的一个重要但以前未被认识到的作用。在这里,我们将讨论我们最近的发现,并结合其他实验室的努力,对各种神经前体细胞因子下游的转录程序进行特征描述。