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Self-interaction, nucleic acid binding, and nucleic acid chaperone activities are unexpectedly retained in the unique ORF1p of zebrafish LINE.在独特的斑马鱼 LINE 的 ORF1p 中出人意料地保留了自我相互作用、核酸结合和核酸伴侣活性。
Mol Cell Biol. 2012 Jan;32(2):458-69. doi: 10.1128/MCB.06162-11. Epub 2011 Nov 21.
2
Structure and properties of the esterase from non-LTR retrotransposons suggest a role for lipids in retrotransposition.非 LTR 反转录转座子酯酶的结构和性质表明其在反转录转座中起作用。
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3
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4
Identification and solution structure of a highly conserved C-terminal domain within ORF1p required for retrotransposition of long interspersed nuclear element-1.长散在核元件1反转录转座所需的ORF1p内高度保守C末端结构域的鉴定及溶液结构
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The L1-ORF1p coiled coil enables formation of a tightly compacted nucleic acid-bound complex that is associated with retrotransposition.L1-ORF1p 卷曲螺旋使得能够形成与逆转录转座相关的紧密紧凑的核酸结合复合物。
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Protein-nucleic acid interactions of LINE-1 ORF1p.LINE-1 ORF1p 的蛋白-核酸相互作用。
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Deletion analysis defines distinct functional domains for protein-protein and nucleic acid interactions in the ORF1 protein of mouse LINE-1.缺失分析确定了小鼠LINE-1的ORF1蛋白中蛋白质-蛋白质和核酸相互作用的不同功能域。
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Primordial Germ Cell Specification and Migration.原始生殖细胞的特化与迁移。
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3
The Influence of LINE-1 and SINE Retrotransposons on Mammalian Genomes.LINE-1 和 SINE 反转录转座子对哺乳动物基因组的影响。
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Differential inhibition of LINE1 and LINE2 retrotransposition by vertebrate AID/APOBEC proteins.脊椎动物 AID/APOBEC 蛋白对 LINE1 和 LINE2 反转录转座的差异抑制作用。
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Structure and properties of the esterase from non-LTR retrotransposons suggest a role for lipids in retrotransposition.非 LTR 反转录转座子酯酶的结构和性质表明其在反转录转座中起作用。
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8
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本文引用的文献

1
Paired mutations abolish and restore the balanced annealing and melting activities of ORF1p that are required for LINE-1 retrotransposition.配对突变消除和恢复了 ORF1p 的平衡退火和熔解活性,这对于 LINE-1 反转录转座是必需的。
Nucleic Acids Res. 2011 Jul;39(13):5611-21. doi: 10.1093/nar/gkr171. Epub 2011 Mar 26.
2
Characterization of LINE-1 ribonucleoprotein particles.LINE-1 核糖核蛋白颗粒的表征。
PLoS Genet. 2010 Oct 7;6(10):e1001150. doi: 10.1371/journal.pgen.1001150.
3
Genetic evidence that the non-homologous end-joining repair pathway is involved in LINE retrotransposition.非同源末端连接修复途径参与长散在核元件逆转录转座的遗传学证据。
PLoS Genet. 2009 Apr;5(4):e1000461. doi: 10.1371/journal.pgen.1000461. Epub 2009 Apr 24.
4
Non-LTR retrotransposons encode noncanonical RRM domains in their first open reading frame.非长末端重复序列逆转座子在其第一个开放阅读框中编码非典型的RNA识别基序结构域。
Proc Natl Acad Sci U S A. 2009 Jan 20;106(3):731-6. doi: 10.1073/pnas.0809964106. Epub 2009 Jan 12.
5
Retrotransposons revisited: the restraint and rehabilitation of parasites.逆转录转座子再探讨:寄生虫的抑制与修复
Cell. 2008 Oct 3;135(1):23-35. doi: 10.1016/j.cell.2008.09.022.
6
Dissecting RNA chaperone activity.剖析RNA伴侣活性。
RNA. 2007 Dec;13(12):2053-60. doi: 10.1261/rna.671807. Epub 2007 Sep 27.
7
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.海葵基因组揭示了后生动物祖先的基因库和基因组组织。
Science. 2007 Jul 6;317(5834):86-94. doi: 10.1126/science.1139158.
8
Identification and solution structure of a highly conserved C-terminal domain within ORF1p required for retrotransposition of long interspersed nuclear element-1.长散在核元件1反转录转座所需的ORF1p内高度保守C末端结构域的鉴定及溶液结构
J Biol Chem. 2007 Aug 24;282(34):24893-904. doi: 10.1074/jbc.M702023200. Epub 2007 Jun 14.
9
Solution structure and functional importance of a conserved RNA hairpin of eel LINE UnaL2.鳗鱼LINE UnaL2保守RNA发夹结构及其功能重要性
Nucleic Acids Res. 2006;34(18):5184-93. doi: 10.1093/nar/gkl664. Epub 2006 Sep 25.
10
Essential domains for ribonucleoprotein complex formation required for retrotransposition of telomere-specific non-long terminal repeat retrotransposon SART1.端粒特异性非长末端重复逆转录转座子SART1逆转录转座所需的核糖核蛋白复合体形成的必需结构域。
Mol Cell Biol. 2006 Jul;26(13):5168-79. doi: 10.1128/MCB.00096-06.

在独特的斑马鱼 LINE 的 ORF1p 中出人意料地保留了自我相互作用、核酸结合和核酸伴侣活性。

Self-interaction, nucleic acid binding, and nucleic acid chaperone activities are unexpectedly retained in the unique ORF1p of zebrafish LINE.

机构信息

Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Midori-ku, Yokohama, Kanagawa, Japan.

出版信息

Mol Cell Biol. 2012 Jan;32(2):458-69. doi: 10.1128/MCB.06162-11. Epub 2011 Nov 21.

DOI:10.1128/MCB.06162-11
PMID:22106409
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3255789/
Abstract

Long interspersed elements (LINEs) are mobile elements that comprise a large proportion of many eukaryotic genomes. Although some LINE-encoded open reading frame 1 proteins (ORF1ps) were suggested to be required for LINE mobilization through binding to their RNA, their general role is not known. The ZfL2-1 ORF1p, which belongs to the esterase-type ORF1p, is especially interesting because it has no known RNA-binding domain. Here we demonstrate that ZfL2-1 ORF1p has all the canonical activities associated with known ORF1ps, including self-interaction, nucleic acid binding, and nucleic acid chaperone activities. In particular, we showed that its chaperone activity is reversible, suggesting that the chaperone activities of many other ORF1ps are also reversible. From this discovery, we propose that LINE ORF1ps play a general role in LINE integration by forming a complex with LINE RNA and rearranging its conformation.

摘要

长散在核元件(LINEs)是一类可移动元件,它们构成了许多真核生物基因组的很大一部分。虽然一些 LINE 编码的开放阅读框 1 蛋白(ORF1ps)被认为通过与它们的 RNA 结合而被需要用于 LINE 移动,但其一般作用尚不清楚。ZfL2-1 ORF1p 属于酯酶型 ORF1p,特别有趣,因为它没有已知的 RNA 结合结构域。在这里,我们证明 ZfL2-1 ORF1p 具有与已知的 ORF1ps 相关的所有典型活性,包括自我相互作用、核酸结合和核酸伴侣活性。特别是,我们表明其伴侣活性是可逆的,这表明许多其他 ORF1ps 的伴侣活性也是可逆的。从这一发现中,我们提出 LINE ORF1ps 通过与 LINE RNA 形成复合物并改变其构象,在 LINE 整合中发挥一般作用。