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Effect of iclR and arcA knockouts on biomass formation and metabolic fluxes in Escherichia coli K12 and its implications on understanding the metabolism of Escherichia coli BL21 (DE3).iclR 和 arcA 敲除对大肠杆菌 K12 生物量形成和代谢通量的影响及其对理解大肠杆菌 BL21 (DE3) 代谢的意义。
BMC Microbiol. 2011 Apr 11;11:70. doi: 10.1186/1471-2180-11-70.
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Glucose uptake regulation in E. coli by the small RNA SgrS: comparative analysis of E. coli K-12 (JM109 and MG1655) and E. coli B (BL21).SgrS 调控大肠杆菌葡萄糖摄取的研究:大肠杆菌 K-12(JM109 和 MG1655)和大肠杆菌 B(BL21)的比较分析。
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Acetate accumulation through alternative metabolic pathways in ackA (-) pta (-) poxB (-) triple mutant in E. coli B (BL21).在大肠杆菌 B (BL21) 的 ackA (-) pta (-) poxB (-) 三重突变体中,通过替代代谢途径积累醋酸盐。
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A minimal base-pairing region of a bacterial small RNA SgrS required for translational repression of ptsG mRNA.细菌小 RNA SgrS 发挥翻译抑制作用所必需的最小碱基配对区域。
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Growth recovery on glucose under aerobic conditions of an Escherichia coli strain carrying a phosphoenolpyruvate:carbohydrate phosphotransferase system deletion by inactivating arcA and overexpressing the genes coding for glucokinase and galactose permease.通过使arcA失活并过表达编码葡萄糖激酶和半乳糖通透酶的基因,在有氧条件下携带磷酸烯醇式丙酮酸:碳水化合物磷酸转移酶系统缺失的大肠杆菌菌株在葡萄糖上的生长恢复。
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Mechanism of RNA silencing by Hfq-binding small RNAs.Hfq结合小RNA介导的RNA沉默机制。
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通过过表达小分子 RNA SgrS 降低大肠杆菌 K-12 的乙酸盐排泄。

Reducing acetate excretion from E. coli K-12 by over-expressing the small RNA SgrS.

机构信息

Biotechnology Core Laboratory, NIDDK, NIH, Bethesda, MD, USA.

出版信息

N Biotechnol. 2013 Jan 25;30(2):269-73. doi: 10.1016/j.nbt.2011.11.007. Epub 2011 Nov 16.

DOI:10.1016/j.nbt.2011.11.007
PMID:22107968
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3322308/
Abstract

When exposed to the nonmetabolized glucose derivative alpha methyl glucoside (αMG), both Escherichia coli K-12 (JM109 and MG1655) and E. coli B (BL21) respond by reducing the concentration of the mRNA of the ptsG gene which is responsible for the biosynthesis of the glucose transporter EIICB(glu). This occurs through the over-expression of the noncoding small RNA SgrS, which interacts specifically with the mRNA of the ptsG gene and prevents its translation. However, when these bacteria are exposed to a glucose concentration of 40 g/L, over-expression of SgrS is observed only in E. coli B (BL21). Unlike E. coli K-12 (JM109 and MG1655), which are affected by high glucose concentration and produce higher levels of acetate, E. coli B (BL21) is not affected. Based on this information, it was assumed that over-expression of SgrS enables E. coli B (BL21) to reduce its acetate excretion by controlling the glucose transport. When SgrS was over-expressed in both E. coli K-12 strains from a multicopy plasmid, it was possible to reduce their acetate excretion levels to those seen in E. coli B. This observation opens a new approach towards controlling bacterial metabolism through the use of noncoding RNA.

摘要

当暴露于未代谢的葡萄糖衍生物α-甲基葡萄糖苷(αMG)时,大肠杆菌 K-12(JM109 和 MG1655)和大肠杆菌 B(BL21)都会通过过度表达非编码小 RNA SgrS 来降低负责葡萄糖转运蛋白 EIICB(glu)生物合成的 ptsG 基因的 mRNA 浓度。这是通过 SgrS 与 ptsG 基因的 mRNA 特异性相互作用并阻止其翻译来实现的。然而,当这些细菌暴露于 40 g/L 的葡萄糖浓度时,仅在大肠杆菌 B(BL21)中观察到 SgrS 的过度表达。与受高葡萄糖浓度影响并产生更高水平乙酸盐的大肠杆菌 K-12(JM109 和 MG1655)不同,大肠杆菌 B(BL21)不受影响。基于此信息,假设 SgrS 的过度表达通过控制葡萄糖转运使大肠杆菌 B(BL21)能够减少其乙酸盐排泄。当 SgrS 在来自多拷贝质粒的两种大肠杆菌 K-12 菌株中过度表达时,能够将其乙酸盐排泄水平降低到大肠杆菌 B 中观察到的水平。这一观察结果为通过使用非编码 RNA 来控制细菌代谢开辟了一条新途径。