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产亚铁血红素菌属,新属,一种中度嗜热的异化铁(III)还原菌,来自深海热液喷口,在δ变形菌中形成一个独特的系统发育分支。

Deferrisoma camini gen. nov., sp. nov., a moderately thermophilic, dissimilatory iron(III)-reducing bacterium from a deep-sea hydrothermal vent that forms a distinct phylogenetic branch in the Deltaproteobacteria.

机构信息

Winogradsky Institute of Microbiology, Russian Academy of Sciences, Prospect 60-letiya, Oktyabrya 7/2, 117312 Moscow, Russia.

Department of Biology and Center for Life in Extreme Environments, Portland State University, PO Box 751, Portland, OR 97207-0751, USA.

出版信息

Int J Syst Evol Microbiol. 2012 Oct;62(Pt 10):2463-2468. doi: 10.1099/ijs.0.038372-0. Epub 2011 Nov 25.

Abstract

A moderately thermophilic, anaerobic, dissimilatory iron(III)-reducing bacterium (strain S3R1(T)) was isolated from a deep-sea hydrothermal vent chimney located on the Eastern Lau Spreading Centre in the Pacific Ocean at a depth of about 2150 m. Cells of strain S3R1(T) were ovals to short rods with a single polar flagellum, Gram-stain-negative, 0.5-0.6 µm in diameter and 0.8-1.3 µm long, growing singly or in pairs. The temperature range for growth was 36-62 °C, with an optimum at 50 °C. The pH range for growth was 5.5-7.5, with an optimum at pH 6.5. Growth of strain S3R1(T) was observed at NaCl concentrations ranging from 1.0 to 5.0 % (w/v), with an optimum at 2.0-2.5 % (w/v). The isolate used acetate, fumarate, malate, maleinate, succinate, propanol, palmitate, stearate, peptone and yeast extract as electron donors for growth and iron(III) reduction. All electron donors were oxidized completely to CO(2) and H(2)O. Iron(III) (in the form of ferrihydrite, ferric citrate or ferric nitrilotriacetate) and elemental sulfur (S(0)) were the electron acceptors that supported growth. The DNA G+C content was 64.4 mol%. Results of 16S rRNA gene sequence analysis showed that the novel bacterium was related to representatives of the orders Desulfuromonadales and Syntrophobacterales with 84-86 % sequence similarity and formed a distinct phylogenetic branch in the Deltaproteobacteria. On the basis of its physiological properties and results of phylogenetic analyses, it is proposed that the new isolate represents the sole species of a novel genus, Deferrisoma camini gen. nov., sp. nov. The type strain of Deferrisoma camini is S3R1(T) ( = DSM 24185(T)  = VKM B-2672(T)).

摘要

一种中度嗜热、厌氧、异化铁(III)还原细菌(菌株 S3R1(T))是从太平洋东劳扩张中心深海热液喷口烟囱中分离得到的,深度约为 2150 米。菌株 S3R1(T)的细胞呈椭圆形至短杆状,有一个单极鞭毛,革兰氏阴性,直径 0.5-0.6 µm,长 0.8-1.3 µm,单独或成对生长。生长的温度范围为 36-62°C,最适温度为 50°C。生长的 pH 值范围为 5.5-7.5,最适 pH 值为 6.5。菌株 S3R1(T)在 NaCl 浓度为 1.0-5.0%(w/v)范围内生长,最适浓度为 2.0-2.5%(w/v)。该分离株以乙酸盐、富马酸盐、苹果酸盐、马来酸盐、琥珀酸盐、丙醇、棕榈酸盐、硬脂酸盐、蛋白胨和酵母提取物作为生长和铁(III)还原的电子供体。所有的电子供体都被完全氧化为 CO2 和 H2O。铁(III)(以水铁矿、柠檬酸铁或铁氮三乙酸盐的形式)和元素硫(S(0))是支持生长的电子受体。DNA G+C 含量为 64.4 mol%。16S rRNA 基因序列分析结果表明,新型细菌与脱硫单胞菌目和互营杆菌目代表的代表具有 84-86%的序列相似性,并在δ变形菌中形成了一个独特的系统发育分支。基于其生理特性和系统发育分析结果,建议新分离株代表一个新属的唯一物种,即 Deferrisoma camini gen. nov.,sp. nov.。Deferrisoma camini 的模式株为 S3R1(T)(=DSM 24185(T)=VKM B-2672(T))。

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