Dipartimento di Fisica, Università degli Studi di Messina and CNISM (Consorzio Nazionale Interuniversitario di Struttura della Materia) Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy.
J Chem Phys. 2012 Jan 21;136(3):035103. doi: 10.1063/1.3677186.
We report protein-protein structure factors of aqueous lysozyme solutions at different pH and ionic strengths, as determined by small-angle neutron scattering experiments. The observed upturn of the structure factor at small wavevectors, as the pH increases, marks a crossover between two different regimes, one dominated by repulsive forces, and another one where attractive interactions become prominent, with the ensuing development of enhanced density fluctuations. In order to rationalize such experimental outcome from a microscopic viewpoint, we have carried out extensive simulations of different coarse-grained models. We have first studied a model in which macromolecules are described as soft spheres interacting through an attractive r(-6) potential, plus embedded pH-dependent discrete charges; we show that the uprise undergone by the structure factor is qualitatively predicted. We have then studied a Derjaguin-Landau-Verwey-Overbeek (DLVO) model, in which only central interactions are advocated; we demonstrate that this model leads to a protein-rich/protein-poor coexistence curve that agrees quite well with the experimental counterpart; experimental correlations are instead reproduced only at low pH and ionic strengths. We have finally investigated a third, "mixed" model in which the central attractive term of the DLVO potential is imported within the distributed-charge approach; it turns out that the different balance of interactions, with a much shorter-range attractive contribution, leads in this latter case to an improved agreement with the experimental crossover. We discuss the relationship between experimental correlations, phase coexistence, and features of effective interactions, as well as possible paths toward a quantitative prediction of structural properties of real lysozyme solutions.
我们报告了在不同 pH 值和离子强度下水溶液溶菌酶的蛋白质-蛋白质结构因子,这些结构因子是通过小角中子散射实验确定的。随着 pH 值的增加,在小波数处观察到结构因子的上翘,标志着两种不同状态之间的交叉,一种状态由排斥力主导,另一种状态则由吸引力主导,随之而来的是增强的密度涨落。为了从微观角度解释这种实验结果,我们对不同的粗粒化模型进行了广泛的模拟。我们首先研究了一种模型,其中大分子被描述为通过吸引力 r(-6) 势和嵌入的 pH 相关离散电荷相互作用的软球;我们表明,结构因子的上升是定性预测的。然后,我们研究了一个德加古恩-兰德文-弗韦尔贝克(DLVO)模型,其中只主张中心相互作用;我们证明,该模型导致了与实验相对应的蛋白质丰富/蛋白质贫共存曲线;而实验相关性仅在低 pH 值和离子强度下得到重现。最后,我们研究了一个“混合”模型,其中将 DLVO 势的中心吸引项导入分布式电荷方法中;结果表明,相互作用的不同平衡,具有更短程的吸引力贡献,导致在这种情况下与实验交叉更好地一致。我们讨论了实验相关性、相共存和有效相互作用特征之间的关系,以及对实际溶菌酶溶液结构性质进行定量预测的可能途径。