138 株分枝杆菌噬菌体的全基因组序列。
Complete genome sequences of 138 mycobacteriophages.
机构信息
Pittsburgh Bacteriophage Institute and Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
出版信息
J Virol. 2012 Feb;86(4):2382-4. doi: 10.1128/JVI.06870-11.
Abstract
Bacteriophages are the most numerous biological entities in the biosphere, and although their genetic diversity is high, it remains ill defined. Mycobacteriophages-the viruses of mycobacterial hosts-provide insights into this diversity as well as tools for manipulating Mycobacterium tuberculosis. We report here the complete genome sequences of 138 new mycobacteriophages, which-together with the 83 mycobacteriophages previously reported-represent the largest collection of phages known to infect a single common host, Mycobacterium smegmatis mc(2) 155.
摘要
噬菌体是生物圈中数量最多的生物实体，尽管它们的遗传多样性很高，但仍然定义不明确。分枝杆菌噬菌体——分枝杆菌宿主的病毒——为这种多样性提供了深入了解，同时也为操纵结核分枝杆菌提供了工具。我们在此报告了 138 种新分枝杆菌噬菌体的完整基因组序列，加上之前报道的 83 种分枝杆菌噬菌体，这代表了已知感染单一常见宿主分枝杆菌 mc(2)155 的最大噬菌体集合。
相似文献
1
Complete genome sequences of 138 mycobacteriophages.138 株分枝杆菌噬菌体的全基因组序列。
J Virol. 2012 Feb;86(4):2382-4. doi: 10.1128/JVI.06870-11.
2
Characterization of mycobacteria and mycobacteriophages isolated from compost at the São Paulo Zoo Park Foundation in Brazil and creation of the new mycobacteriophage Cluster U.对从巴西圣保罗动物园基金会的堆肥中分离出的分枝杆菌和分枝杆菌噬菌体进行表征，并创建新的分枝杆菌噬菌体U簇。
BMC Microbiol. 2016 Jun 17;16(1):111. doi: 10.1186/s12866-016-0734-3.
3
Cluster M mycobacteriophages Bongo, PegLeg, and Rey with unusually large repertoires of tRNA isotypes.具有异常大量tRNA同型异构体库的分枝杆菌噬菌体Bongo、PegLeg和Rey的聚类M
J Virol. 2014 Mar;88(5):2461-80. doi: 10.1128/JVI.03363-13. Epub 2013 Dec 11.
4
Comparative genomics of the mycobacteriophages: insights into bacteriophage evolution.分枝杆菌噬菌体的比较基因组学：对噬菌体进化的见解
Res Microbiol. 2008 Jun;159(5):332-9. doi: 10.1016/j.resmic.2008.04.008. Epub 2008 May 7.
5
On the nature of mycobacteriophage diversity and host preference.论分枝杆菌噬菌体多样性和宿主偏好的本质。
Virology. 2012 Dec 20;434(2):187-201. doi: 10.1016/j.virol.2012.09.026. Epub 2012 Oct 22.
6
Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution.拓展分枝杆菌噬菌体的多样性：对基因组结构和进化的深入了解。
PLoS One. 2011 Jan 27;6(1):e16329. doi: 10.1371/journal.pone.0016329.
7
Isolation and characterization of bacteriophages from India, with lytic activity against Mycobacterium tuberculosis.从印度分离并鉴定对结核分枝杆菌具有裂解活性的噬菌体。
Can J Microbiol. 2018 Jul;64(7):483-491. doi: 10.1139/cjm-2017-0387. Epub 2018 Mar 15.
8
The secret lives of mycobacteriophages.分枝杆菌噬菌体的秘密生活。
Adv Virus Res. 2012;82:179-288. doi: 10.1016/B978-0-12-394621-8.00015-7.
9
Complete genome sequence analysis of the novel mycobacteriophage Shandong1.新型分枝杆菌噬菌体山东1的全基因组序列分析
Arch Virol. 2017 Dec;162(12):3903-3905. doi: 10.1007/s00705-017-3534-7. Epub 2017 Aug 21.
10
Mycobacteriophage Marvin: a new singleton phage with an unusual genome organization.噬菌 Marvin：一种具有不寻常基因组组织的新型单链噬菌体。
J Virol. 2012 May;86(9):4762-75. doi: 10.1128/JVI.00075-12. Epub 2012 Feb 22.
引用本文的文献
1
Whole-genome sequence of subcluster BE1 bacteriophage Persimmon.亚群BE1噬菌体柿子的全基因组序列
Microbiol Resour Announc. 2025 Jun 12;14(6):e0002425. doi: 10.1128/mra.00024-25. Epub 2025 Apr 29.
2
A Review on Mycobacteriophages: From Classification to Applications.分枝杆菌噬菌体综述：从分类到应用
Pathogens. 2022 Jul 7;11(7):777. doi: 10.3390/pathogens11070777.
3
Phage Therapy for Mycobacterium Abscessus and Strategies to Improve Outcomes.脓肿分枝杆菌的噬菌体疗法及改善治疗效果的策略
Microorganisms. 2021 Mar 14;9(3):596. doi: 10.3390/microorganisms9030596.
4
Bacteriophage-Based Methods for Detection of Viable subsp. and Their Potential for Diagnosis of Johne's Disease.基于噬菌体的检测副结核分枝杆菌亚种活菌的方法及其对副结核病诊断的潜力
Front Vet Sci. 2021 Mar 11;8:632498. doi: 10.3389/fvets.2021.632498. eCollection 2021.
5
Pathogenic Determinants of the Complex: An Unsuspected Role for Distributive Conjugal Transfer.该复合体的致病决定因素：分配性接合转移的意外作用。
Microorganisms. 2021 Feb 10;9(2):348. doi: 10.3390/microorganisms9020348.
6
Characterization and Genome Sequence of the Mycobacteriophage Donny.分枝杆菌噬菌体唐尼的特性鉴定与基因组序列
Microbiol Resour Announc. 2020 Jul 23;9(30):e00373-20. doi: 10.1128/MRA.00373-20.
7
Structures of Three Actinobacteriophage Capsids: Roles of Symmetry and Accessory Proteins.三种放线噬菌体衣壳的结构：对称和辅助蛋白的作用。
Viruses. 2020 Mar 8;12(3):294. doi: 10.3390/v12030294.
8
Antimicrobial activity of Mycobacteriophage D29 Lysin B during Mycobacterium ulcerans infection.分枝杆菌噬菌体 D29 溶菌酶 B 对溃疡分枝杆菌感染的抗菌活性。
PLoS Negl Trop Dis. 2019 Aug 19;13(8):e0007113. doi: 10.1371/journal.pntd.0007113. eCollection 2019 Aug.
9
Nine Novel Phages from a Plateau Lake in Southwest China: Insights into Phage Diversity.中国西南高原湖泊的九种新型噬菌体：噬菌体多样性的新见解。
Viruses. 2019 Jul 5;11(7):615. doi: 10.3390/v11070615.
10
Comparative genomic analysis of eight novel haloalkaliphilic bacteriophages from Lake Elmenteita, Kenya.比较来自肯尼亚埃尔门泰塔湖的 8 种新型嗜盐嗜碱噬菌体的基因组分析。
PLoS One. 2019 Feb 14;14(2):e0212102. doi: 10.1371/journal.pone.0212102. eCollection 2019.
本文引用的文献
1
Cluster K mycobacteriophages: insights into the evolutionary origins of mycobacteriophage TM4.聚类 K 分枝杆菌噬菌体：对 TM4 分枝杆菌噬菌体进化起源的深入了解。
PLoS One. 2011;6(10):e26750. doi: 10.1371/journal.pone.0026750. Epub 2011 Oct 28.
2
Bacteriophages and their genomes.噬菌体及其基因组。
Curr Opin Virol. 2011 Oct;1(4):298-303. doi: 10.1016/j.coviro.2011.06.009.
3
Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution.拓展分枝杆菌噬菌体的多样性：对基因组结构和进化的深入了解。
PLoS One. 2011 Jan 27;6(1):e16329. doi: 10.1371/journal.pone.0016329.
4
Marine viruses--major players in the global ecosystem.海洋病毒——全球生态系统中的主要参与者。
Nat Rev Microbiol. 2007 Oct;5(10):801-12. doi: 10.1038/nrmicro1750.
5
Inquiry learning. Teaching scientific inquiry.探究式学习。科学探究教学。
Science. 2006 Dec 22;314(5807):1880-1. doi: 10.1126/science.1136796.
6
Hot new virus, deep connections.热门新病毒，深层联系。
Proc Natl Acad Sci U S A. 2004 May 18;101(20):7495-6. doi: 10.1073/pnas.0402151101. Epub 2004 May 11.
7
A bacteriophage specific for Mycobacterium tuberculosis, varieties hominis and bovis.一种对结核分枝杆菌、人型变种和牛型变种具有特异性的噬菌体。
Am Rev Respir Dis. 1960 Dec;82:781-6. doi: 10.1164/arrd.1960.82.6.781.
8
Origins of highly mosaic mycobacteriophage genomes.高度嵌合的分枝杆菌噬菌体基因组的起源
Cell. 2003 Apr 18;113(2):171-82. doi: 10.1016/s0092-8674(03)00233-2.
9
Virioplankton: viruses in aquatic ecosystems.浮游病毒：水生生态系统中的病毒
Microbiol Mol Biol Rev. 2000 Mar;64(1):69-114. doi: 10.1128/MMBR.64.1.69-114.2000.
Zotero 插件