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三磷酸肌醇和兰尼碱受体关键结构域的结构和功能保守性。

Structural and functional conservation of key domains in InsP3 and ryanodine receptors.

机构信息

Ontario Cancer Institute and Department of Medical Biophysics, University of Toronto, Ontario M5G 1L7, Canada.

出版信息

Nature. 2012 Jan 29;483(7387):108-12. doi: 10.1038/nature10751.

DOI:10.1038/nature10751
PMID:22286060
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3378505/
Abstract

Inositol-1,4,5-trisphosphate receptors (InsP(3)Rs) and ryanodine receptors (RyRs) are tetrameric intracellular Ca(2+) channels. In each of these receptor families, the pore, which is formed by carboxy-terminal transmembrane domains, is regulated by signals that are detected by large cytosolic structures. InsP(3)R gating is initiated by InsP(3) binding to the InsP(3)-binding core (IBC, residues 224-604 of InsP(3)R1) and it requires the suppressor domain (SD, residues 1-223 of InsP(3)R1). Here we present structures of the amino-terminal region (NT, residues 1-604) of rat InsP(3)R1 with (3.6 Å) and without (3.0 Å) InsP(3) bound. The arrangement of the three NT domains, SD, IBC-β and IBC-α, identifies two discrete interfaces (α and β) between the IBC and SD. Similar interfaces occur between equivalent domains (A, B and C) in RyR1 (ref. 9). The orientations of the three domains when docked into a tetrameric structure of InsP(3)R and of the ABC domains docked into RyR are remarkably similar. The importance of the α-interface for activation of InsP(3)R and RyR is confirmed by mutagenesis and, for RyR, by disease-causing mutations. Binding of InsP(3) causes partial closure of the clam-like IBC, disrupting the β-interface and pulling the SD towards the IBC. This reorients an exposed SD loop ('hotspot' (HS) loop) that is essential for InsP(3)R activation. The loop is conserved in RyR and includes mutations that are associated with malignant hyperthermia and central core disease. The HS loop interacts with an adjacent NT, suggesting that activation re-arranges inter-subunit interactions. The A domain of RyR functionally replaced the SD in full-length InsP(3)R, and an InsP(3)R in which its C-terminal transmembrane region was replaced by that from RyR1 was gated by InsP(3) and blocked by ryanodine. Activation mechanisms are conserved between InsP(3)R and RyR. Allosteric modulation of two similar domain interfaces within an N-terminal subunit reorients the first domain (SD or A domain), allowing it, through interactions of the second domain of an adjacent subunit (IBC-β or B domain), to gate the pore.

摘要

肌醇 1,4,5-三磷酸受体(InsP(3)Rs)和兰尼碱受体(RyRs)是四聚体细胞内 Ca(2+)通道。在这两个受体家族中,由羧基末端跨膜结构域形成的孔由通过大胞质结构检测到的信号调节。InsP(3)R 的门控由 InsP(3)与 InsP(3)结合核心(IBC,InsP(3)R1 的残基 224-604)结合引发,并且需要抑制域(SD,InsP(3)R1 的残基 1-223)。在这里,我们展示了与(3.6 Å)和不与(3.0 Å)InsP(3)结合的大鼠 InsP(3)R1 的氨基末端结构域(NT,残基 1-604)的结构。三个 NT 结构域(SD、IBC-β 和 IBC-α)的排列确定了 IBC 和 SD 之间的两个离散界面(α 和 β)。在 RyR1 中的等效结构域(A、B 和 C)之间也存在类似的界面(ref.9)。当将三个结构域对接入 InsP(3)R 的四聚体结构中以及将 ABC 结构域对接入 RyR 时,它们的取向非常相似。对 InsP(3)R 和 RyR 的激活重要性的α-界面通过突变得到证实,并且对于 RyR ,通过引起疾病的突变得到证实。InsP(3)的结合导致蛤壳样 IBC 的部分关闭,破坏β-界面并将 SD 拉向 IBC。这使暴露的 SD 环(“热点”(HS)环)重新定向,这对于 InsP(3)R 的激活至关重要。该环在 RyR 中保守,包括与恶性高热和中央核心疾病相关的突变。HS 环与相邻的 NT 相互作用,表明激活重新排列了亚基间的相互作用。RyR 的 A 结构域完全替代了全长 InsP(3)R 的 SD,并且其 C 末端跨膜结构域被 RyR1 取代的 InsP(3)R 可被 InsP(3)门控并被兰尼碱阻断。InsP(3)R 和 RyR 之间的激活机制是保守的。在 N 端亚基内的两个类似的结构域界面的变构调节重新定向第一个结构域(SD 或 A 结构域),从而允许它通过与相邻亚基的第二个结构域(IBC-β 或 B 结构域)的相互作用,使孔门控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/dc625af69fb9/ukmss-40158-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/66403bbb747d/ukmss-40158-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/d46ad30c7192/ukmss-40158-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/c0e85c1684b5/ukmss-40158-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/dc625af69fb9/ukmss-40158-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/66403bbb747d/ukmss-40158-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/d46ad30c7192/ukmss-40158-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/c0e85c1684b5/ukmss-40158-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13fa/3378505/dc625af69fb9/ukmss-40158-f0004.jpg

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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Apo and InsP₃-bound crystal structures of the ligand-binding domain of an InsP₃ receptor.配体结合域与 Apo 和 InsP₃ 结合的肌醇三磷酸受体的晶体结构。
Nat Struct Mol Biol. 2011 Sep 4;18(10):1172-4. doi: 10.1038/nsmb.2112.
3
Flexible architecture of IP3R1 by Cryo-EM.Cryo-EM 解析 IP3R1 的灵活结构。
Nat Commun. 2023 Oct 28;14(1):6897. doi: 10.1038/s41467-023-42707-3.
4
Calcium signals and potential therapy targets in ovarian cancer (Review).钙信号与卵巢癌的潜在治疗靶点(综述)。
Int J Oncol. 2023 Nov;63(5). doi: 10.3892/ijo.2023.5573. Epub 2023 Sep 15.
5
Understanding IPR channels: From structural underpinnings to ligand-dependent conformational landscape.理解 IPR 通道:从结构基础到配体依赖的构象景观。
Cell Calcium. 2023 Sep;114:102770. doi: 10.1016/j.ceca.2023.102770. Epub 2023 Jun 22.
6
Ligand sensitivity of type-1 inositol 1,4,5-trisphosphate receptor is enhanced by the D2594K mutation.D2594K 突变增强了 1,4,5-三磷酸肌醇受体 1 型的配体敏感性。
Pflugers Arch. 2023 May;475(5):569-581. doi: 10.1007/s00424-023-02796-x. Epub 2023 Mar 7.
7
Conformational motions and ligand-binding underlying gating and regulation in IPR channel.IPR 通道门控和调节的构象运动和配体结合。
Nat Commun. 2022 Nov 14;13(1):6942. doi: 10.1038/s41467-022-34574-1.
8
-D-inositol Trisphosphate Signalling in Oomycetes.卵菌纲中的D-肌醇三磷酸信号传导
Microorganisms. 2022 Oct 31;10(11):2157. doi: 10.3390/microorganisms10112157.
9
Recent Developments on the Roles of Calcium Signals and Potential Therapy Targets in Cervical Cancer.钙信号在宫颈癌中的作用及潜在治疗靶点的研究进展。
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10
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Structure. 2011 Aug 10;19(8):1192-9. doi: 10.1016/j.str.2011.05.003.
4
The amino-terminal disease hotspot of ryanodine receptors forms a cytoplasmic vestibule.兰尼碱受体氨基端疾病热点形成细胞质前庭。
Nature. 2010 Nov 25;468(7323):585-8. doi: 10.1038/nature09471. Epub 2010 Nov 3.
5
IP(3) receptors: toward understanding their activation.IP(3) 受体:探索其激活机制。
Cold Spring Harb Perspect Biol. 2010 Dec;2(12):a004010. doi: 10.1101/cshperspect.a004010. Epub 2010 Oct 27.
6
Structural studies of inositol 1,4,5-trisphosphate receptor: coupling ligand binding to channel gating.肌醇 1,4,5-三磷酸受体的结构研究:配体结合与通道门控的偶联。
J Biol Chem. 2010 Nov 12;285(46):36092-9. doi: 10.1074/jbc.M110.140160. Epub 2010 Sep 15.
7
Tyr-167/Trp-168 in type 1/3 inositol 1,4,5-trisphosphate receptor mediates functional coupling between ligand binding and channel opening.1/3 型肌醇 1,4,5-三磷酸受体中 Tyr-167/Trp-168 介导配体结合与通道开放之间的功能偶联。
J Biol Chem. 2010 Nov 12;285(46):36081-91. doi: 10.1074/jbc.M110.140129. Epub 2010 Sep 2.
8
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J Cell Sci. 2010 May 15;123(Pt 10):1775-84. doi: 10.1242/jcs.064071. Epub 2010 Apr 27.
9
Regulation of inositol 1,4,5-trisphosphate receptors by cAMP independent of cAMP-dependent protein kinase.钙调素非依赖的环磷酸腺苷调节肌醇 1,4,5-三磷酸受体,而不依赖于环磷酸腺苷依赖性蛋白激酶。
J Biol Chem. 2010 Apr 23;285(17):12979-89. doi: 10.1074/jbc.M109.096016. Epub 2010 Feb 26.
10
Crystal structures of the N-terminal domains of cardiac and skeletal muscle ryanodine receptors: insights into disease mutations.心脏和骨骼肌肌质网钙释放通道 N 端结构域的晶体结构:疾病突变的见解。
Structure. 2009 Nov 11;17(11):1505-14. doi: 10.1016/j.str.2009.08.016.