Department of Chemistry and Biochemistry, University of Texas at Austin, Austin, Texas 78712-0165, USA.
J Chem Phys. 2012 Feb 21;136(7):074103. doi: 10.1063/1.3684549.
A generalized solid-state nudged elastic band (G-SSNEB) method is presented for determining reaction pathways of solid-solid transformations involving both atomic and unit-cell degrees of freedom. We combine atomic and cell degrees of freedom into a unified description of the crystal structure so that calculated reaction paths are insensitive to the choice of periodic cell. For the rock-salt to wurtzite transition in CdSe, we demonstrate that the method is robust for mechanisms dominated either by atomic motion or by unit-cell deformation; notably, the lowest-energy transition mechanism found by our G-SSNEB changes with cell size from a concerted transformation of the cell coordinates in small cells to a nucleation event in large cells. The method is efficient and can be applied to systems in which the force and stress tensor are calculated using density functional theory.
本文提出了一种广义固态推挽弹性带(G-SSNEB)方法,用于确定涉及原子和晶胞自由度的固-固转变的反应途径。我们将原子和晶胞自由度结合到晶体结构的统一描述中,使得计算得到的反应路径不受周期性晶胞选择的影响。对于 CdSe 的岩盐相到纤锌矿相的转变,我们证明该方法对于由原子运动或晶胞变形主导的机制具有鲁棒性;值得注意的是,我们的 G-SSNEB 方法找到的最低能量转变机制随着晶胞尺寸的变化而变化,在小晶胞中晶胞坐标的协同转变,而在大晶胞中则是成核事件。该方法效率高,可应用于使用密度泛函理论计算力和应力张量的体系。