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玉米(Zea mays L.)FK506 结合蛋白基因家族的全基因组分析和环境响应谱分析。

Genome-wide analysis and environmental response profiling of the FK506-binding protein gene family in maize (Zea mays L.).

机构信息

Maize Institute, Shandong Academy of Agricultural Sciences/National Maize Improvement Sub-Center, Jinan, Shandong 250100, PR China.

出版信息

Gene. 2012 May 1;498(2):212-22. doi: 10.1016/j.gene.2012.01.094. Epub 2012 Feb 16.

DOI:10.1016/j.gene.2012.01.094
PMID:22366304
Abstract

The FK506-binding proteins (FKBPs) belong to the peptidyl-prolyl cis/trans isomerase (PPIase) superfamily, and have been implicated in a wide spectrum of biological processes, including protein folding, hormone signaling, plant growth, and stress responses. Genome-wide structural and evolutionary analyses of the entire FKBP gene family have been conducted in Arabidopsis and rice. In the present study, a genome-wide analysis was performed to identify all maize FKBP genes. The availability of complete maize genome sequences allowed for the identification of 24 FKBP genes. Chromosomal locations in the maize genome were determined and the protein domain and motif organization of ZmFKBPs analyzed. The phylogenetic relationships between maize FKBPs were also assessed. The expression profiles of ZmFKBP genes were measured under different environmental conditions and revealed distinct ZmFKBP gene expression patterns under heat, cold, salt, and drought stress. These data not only contribute to a better understanding of the complex regulation of the maize FKBP gene family, but also provide evidence supporting the role of FKBPs in multiple signaling pathways involved in stress responses. This investigation may provide valuable information for further research on stress tolerance in plants and potential strategies for enhancing maize survival under stressful conditions.

摘要

FK506 结合蛋白(FKBP)属于肽脯氨酰顺/反异构酶(PPIase)超家族,与广泛的生物过程有关,包括蛋白质折叠、激素信号、植物生长和应激反应。已在拟南芥和水稻中对整个 FKBP 基因家族进行了全基因组结构和进化分析。在本研究中,进行了全基因组分析以鉴定所有玉米 FKBP 基因。完整的玉米基因组序列的可用性允许鉴定 24 个 FKBP 基因。确定了玉米基因组中的染色体位置,并分析了 ZmFKBPs 的蛋白结构域和基序组织。还评估了玉米 FKBPs 之间的系统发育关系。测量了不同环境条件下 ZmFKBP 基因的表达谱,揭示了热、冷、盐和干旱胁迫下独特的 ZmFKBP 基因表达模式。这些数据不仅有助于更好地理解玉米 FKBP 基因家族的复杂调控,还为 FKBPs 在涉及应激反应的多个信号通路中的作用提供了证据。这项研究可以为植物的应激耐受性的进一步研究以及在胁迫条件下提高玉米生存能力的潜在策略提供有价值的信息。

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